Metabolic Pathway Profiler (v4)


Profiler search with all genomes
CAzy - DBCAN Overview
Browse/edit genome identifiers
umap

Notes / FAQ

Syntrophomonas species (10)

3171459742213018027609343874841684742
GHCBMCEGTPLSLHAAcohesin#ProteinsSecMPTMTMHMM
dbcan
cell
summ

Syntrophomonas curvata, Scurva Batch1_genome_fasta/S_curvata edit

40
7		17
5		11
9		560
0		420
0		29711642
395 (13.3%)
24		6426
866 (29.1%)
34		29
22 (0.7%)
12		2757
541 (18.2%)
1
dbcan
cell
summ

Syntrophomonas erecta, DSM 16215 IMG: Gs0157275 edit

0
4		0
10		0
5		00
0		000
0		24561272
303 (12.3%)
26		5315
694 (28.3%)
30		14
13 (0.5%)
10		2317
456 (18.6%)
1
dbcan
cell
summ

Syntrophomonas erecta, GB-438 Batch2_genome_fasta/S.erecta.GB-438 edit

28
4		17
10		8
5		460
0		430
0		24561272
303 (12.3%)
26		5315
694 (28.3%)
30		14
13 (0.5%)
10		2317
456 (18.6%)
1
dbcan
cell
summ

Syntrophomonas erecta sporosyntropha, Sespor Batch1_genome_fasta/S_e_sporo edit

28
5		17
10		8
5		480
0		430
0		25841290
309 (12.0%)
26		5353
710 (27.5%)
30		14
13 (0.5%)
10		2318
463 (17.9%)
1
dbcan
cell
summ

Syntrophomonas palmitatica, JCM14374 Spalm IMG: Gs0110775 edit

36
10		12
12		8
8		550
0		410
4		28091338
328 (11.7%)
23		4653
727 (25.9%)
28		15
15 (0.5%)
8		1951
474 (16.9%)
1
dbcan
cell
summ

Syntrophomonas wolfei, saponavida Batch4_genome_fasta/bc2031 edit

39
12		16
3		14
12		531
0		320
0		33321884
436 (13.1%)
23		7513
973 (29.2%)
32		31
26 (0.8%)
13		3290
635 (19.1%)
1
GHCBMCEGTPLSLHAAcohesin#ProteinsSecMPTMTMHMM
dbcan
cell
summ

Syntrophomonas wolfei (Swol), Goettingen.DSM2245B IMG: Gs0120309 edit

36
8		15
14		11
5		420
0		320
0		26431405
329 (12.4%)
25		4719
679 (25.7%)
30		16
13 (0.5%)
9		2014
407 (15.4%)
1
dbcan
cell
summ

Syntrophomonas wolfei methylbutyratica, Swm Batch1_genome_fasta/SM1 edit

38
17		15
7		13
8		500
0		420
0		29971673
388 (12.9%)
22		5493
794 (26.5%)
30		28
21 (0.7%)
11		2335
474 (15.8%)
1
dbcan
cell
summ

Syntrophomonas wolfei subsp. wolfei, Goettingen IMG: 637000316 edit

36
8		15
14		11
5		420
0		320
0		26431405
329 (12.4%)
25		4719
679 (25.7%)
30		16
13 (0.5%)
9		2011
406 (15.4%)
1
dbcan
cell
summ

Syntrophomonas zehnderi, OL-4 Szehn IMG: GCF_000983115.1 edit

36
14		21
1		13
11		300
0		110
0		27181307
318 (11.7%)
22		4850
668 (24.6%)
29		24
19 (0.7%)
10		2112
430 (15.8%)
1

Syntrophus species (4)

23862403708024013269226841051152208
GHCBMCEGTPLSLHAAcohesin#ProteinsSecMPTMTMHMM
dbcan
cell
summ

MPOB, Sfum IMG: Syntrophobacter.fumaroxidans.MPOB edit

64
8		18
12		11
6		1113
0		050
2		41393375
760 (18.4%)
19		9108
1362 (32.9%)
41		42
32 (0.8%)
16		3929
715 (17.3%)
1
dbcan
cell
summ

Syntrophus aciditrophicus, SB NCBI:GCF_000013405.1 edit

52
6		14
1		8
5		954
0		050
0		29171965
448 (15.4%)
23		5370
857 (29.4%)
36		27
25 (0.9%)
14		2195
474 (16.2%)
2
dbcan
cell
summ

Syntrophus buswellii, Sbus Batch1_genome_fasta/S_buswelii edit

60
4		15
3		10
4		771
0		070
0		28732130
479 (16.7%)
25		5423
878 (30.6%)
33		31
27 (0.9%)
15		2195
475 (16.5%)
1
dbcan
cell
summ

Syntrophus gentianae, DSM8423 NCBI:GCF_900109885.1 edit

62
12		15
1		11
5		870
0		070
0		33402571
581 (17.4%)
25		6153
1008 (30.2%)
32		36
31 (0.9%)
14		2511
544 (16.3%)
1

Methanospirillum species (5)

1068162740029016839251450411502680
GHCBMCEGTPLSLHAAcohesin#ProteinsSecMPTMTMHMM
dbcan
cell
summ

Methanospirillum hungatei, GP1 Batch4_genome_fasta/bc2028 edit

20
11		17
3		1
1		470
0		070
0		31772025
470 (14.8%)
15		6879
962 (30.3%)
26		41
32 (1.0%)
12		2828
514 (16.2%)
1
dbcan
cell
summ

Methanospirillum lacunae, Ki8-1 Batch4_genome_fasta/bc2013 edit

19
10		14
8		2
0		660
0		040
0		34162552
597 (17.5%)
16		7893
1118 (32.7%)
26		35
29 (0.8%)
12		3272
580 (17.0%)
1
dbcan
cell
summ

Methanospirillum stamsii, Pt1 Batch4_genome_fasta/bc2029 edit

27
12		16
7		1
0		630
0		060
0		36652261
536 (14.6%)
16		7309
1062 (29.0%)
26		38
29 (0.8%)
12		2965
548 (15.0%)
2
dbcan
cell
summ

Methanospirillum.hungatei GP1, MhGP1 IMG: Methanospirillum.hungatei.GP1 edit

20
11		17
3		1
1		470
0		070
0		31782025
470 (14.8%)
15		6885
964 (30.3%)
26		41
32 (1.0%)
12		2828
514 (16.2%)
1
dbcan
cell
summ

Methanospirillum.hungatei.JF-1, MhunJF1 IMG: Methanospirillum.hungatei.JF-1 edit

20
8		17
5		1
1		510
0		050
0		34031913
441 (13.0%)
15		6431
935 (27.5%)
26		35
28 (0.8%)
14		2662
524 (15.4%)
1

Plant-associated microbes (16)

24146433921633650180088312156672930973616832
GHCBMCEGTPLSLHAAcohesin#ProteinsSecMPTMTMHMM
dbcan
cell
summ

Bacillus subtilis, 30VD-1 Batch4_genome_fasta/bc2033 edit

119
142		41
14		27
13		918
0		050
0		39192563
582 (14.9%)
23		12298
1369 (34.9%)
42		58
37 (0.9%)
17		5628
952 (24.3%)
2
dbcan
cell
summ

Dietzia cinnamea, 55 Batch3_genome_fasta/D.cinnamea edit

65
15		8
3		19
0		670
0		080
0		34061679
388 (11.4%)
16		7624
929 (27.3%)
22		54
37 (1.1%)
19		3539
658 (19.3%)
1
dbcan
cell
summ

Fictibacillus phosphorivorans, TY7 Batch4_genome_fasta/bc2016 edit

102
48		35
15		18
14		590
0		090
0		47092825
626 (13.3%)
23		13308
1585 (33.7%)
42		73
48 (1.0%)
18		5953
1085 (23.0%)
2
dbcan
cell
summ

Geodermatophilus sp., RDM14 Batch4_genome_fasta/bc2014 edit

93
82		26
3		15
4		730
0		0120
0		41862639
603 (14.4%)
24		10730
1279 (30.6%)
31		59
42 (1.0%)
22		5023
909 (21.7%)
1
dbcan
cell
summ

Methylobacterium radiotolerans, GTSA1 Batch2_genome_fasta/M.radiotolerans.GTSA1 edit

112
48		14
5		15
11		1482
0		0170
0		67086849
1530 (22.8%)
26		15867
2496 (37.2%)
52		102
75 (1.1%)
23		6962
1286 (19.2%)
1
dbcan
cell
summ

Methylorubrum populi, CTY4 Batch4_genome_fasta/bc2015 edit

104
39		8
4		10
5		1193
0		0110
0		47734967
1110 (23.3%)
26		11131
1798 (37.7%)
45		67
45 (0.9%)
18		4843
931 (19.5%)
1
GHCBMCEGTPLSLHAAcohesin#ProteinsSecMPTMTMHMM
dbcan
cell
summ

Micromonospora inositola, Utrum1 Batch4_genome_fasta/bc2035 edit

209
276		123
121		25
6		1385
0		0160
0		68554714
1052 (15.3%)
16		17925
2235 (32.6%)
34		98
73 (1.1%)
19		8157
1462 (21.3%)
2
dbcan
cell
summ

Mucilaginibacter gossypii, cycad 4 Batch3_genome_fasta/M.gossypii edit

349
723		77
287		51
19		13413
1		0120
0		59640
0 (0.0%)
0		0
0 (0.0%)
0		0
0 (0.0%)
0		0
0 (0.0%)
0
dbcan
cell
summ

Mucilaginibacter sabulilitoris, SNA2 Batch2_genome_fasta/M.sabulilitoris edit

349
640		64
273		54
24		15613
0		0180
0		64529763
2015 (31.2%)
19		15717
3054 (47.3%)
46		57
45 (0.7%)
18		6174
1135 (17.6%)
1
dbcan
cell
summ

Niallia taxi, AG-1 Batch4_genome_fasta/bc2040 edit

184
338		47
11		27
13		922
0		050
2		57643090
718 (12.5%)
21		17213
1932 (33.5%)
37		95
63 (1.1%)
17		7757
1399 (24.3%)
2
dbcan
cell
summ

Peribacillus frigoritolerans, 30N-5 Batch4_genome_fasta/bc2034 edit

112
89		46
3		24
18		840
0		0110
0		52972880
650 (12.3%)
24		16008
1716 (32.4%)
38		61
40 (0.8%)
17		7238
1198 (22.6%)
1
dbcan
cell
summ

Priestia megaterium, 10L1 Batch3_genome_fasta/P.megaterium.101L edit

114
142		46
10		29
20		902
0		060
0		67823739
855 (12.6%)
23		18283
2156 (31.8%)
45		75
52 (0.8%)
19		8329
1542 (22.7%)
1
GHCBMCEGTPLSLHAAcohesin#ProteinsSecMPTMTMHMM
dbcan
cell
summ

Sphingomonas sp., CR2A3 Batch4_genome_fasta/bc2036 edit

159
230		27
24		27
10		6712
0		080
0		36794914
1053 (28.6%)
26		8295
1542 (41.9%)
40		27
20 (0.5%)
18		3512
662 (18.0%)
1
dbcan
cell
summ

Variovorax paradoxus, 2u118 Batch2_genome_fasta/V.paradoxus edit

119
27		27
11		16
10		1092
0		0140
0		64646557
1424 (22.0%)
26		15527
2321 (35.9%)
52		74
54 (0.8%)
19		6735
1169 (18.1%)
2
dbcan
cell
summ

Variovorax paradoxus, SPNA7 Batch3_genome_fasta/V.paradoxus.SPNA7 edit

118
24		29
11		15
9		1132
0		0120
0		65277014
1525 (23.4%)
26		15660
2387 (36.6%)
51		72
52 (0.8%)
19		6787
1184 (18.1%)
2
dbcan
cell
summ

Variovorax sp., EBFNA2 Batch2_genome_fasta/V.boronicumulans edit

106
26		25
17		20
10		931
0		0160
0		68277064
1536 (22.5%)
26		16639
2510 (36.8%)
57		72
53 (0.8%)
20		7191
1260 (18.5%)
2

Anaerobic Plant Degradation (19)

24525272711387107450068249135872591363814344
GHCBMCEGTPLSLHAAcohesin#ProteinsSecMPTMTMHMM
dbcan
cell
summ

Clostridium subterminale, CB-LS10-1 Batch3_genome_fasta/CB-LS10-1 edit

41
22		15
6		16
16		700
0		020
0		35731328
320 (9.0%)
20		9667
1087 (30.4%)
30		67
44 (1.2%)
13		4327
793 (22.2%)
1
dbcan
cell
summ

Exiguobacterium mexicanum, AnGL24 Batch3_genome_fasta/FD-YE-25-4 edit

94
147		22
12		12
9		481
0		030
0		30511721
394 (12.9%)
22		9480
1093 (35.8%)
30		43
28 (0.9%)
16		4336
805 (26.4%)
2
dbcan
cell
summ

FD_25_22, AnGL7 Batch1_genome_fasta/FD_25_22 edit

93
102		22
8		7
2		657
0		030
0		35632754
614 (17.2%)
18		10256
1286 (36.1%)
53		63
49 (1.4%)
20		4501
799 (22.4%)
2
dbcan
cell
summ

FD_25_27, AnGL8 Batch1_genome_fasta/FD_25_27 edit

87
97		16
6		5
0		510
0		000
0		31062174
497 (16.0%)
23		7968
987 (31.8%)
48		39
27 (0.9%)
13		3529
638 (20.5%)
1
dbcan
cell
summ

FD_MS_7_1, AnGL28 Batch1_genome_fasta/FD_MS_7_1 edit

234
309		44
66		11
7		792
4		030
0		34904800
1021 (29.3%)
21		7507
1518 (43.5%)
34		35
26 (0.7%)
16		3067
640 (18.3%)
2
dbcan
cell
summ

FD_SO4_25_1_F22, AnGL30 Batch1_genome_fasta/FD_SO4_25_1_F22 edit

156
342		24
83		11
7		646
4		010
0		21443280
666 (31.1%)
14		5292
1004 (46.8%)
32		24
18 (0.8%)
11		2095
383 (17.9%)
1
GHCBMCEGTPLSLHAAcohesin#ProteinsSecMPTMTMHMM
dbcan
cell
summ

FD_SO4_37_1, AnGL2 Batch1_genome_fasta/FD_SO4_37_1 edit

234
309		44
66		11
7		792
4		030
0		34894796
1020 (29.2%)
21		7520
1519 (43.5%)
34		35
26 (0.7%)
16		3075
642 (18.4%)
2
dbcan
cell
summ

FD_YE_25_21, AnGL21 Batch1_genome_fasta/FD_YE_25_21 edit

95
96		22
11		7
0		665
0		020
0		43093875
860 (20.0%)
23		11704
1563 (36.3%)
57		54
42 (1.0%)
16		5163
958 (22.2%)
2
dbcan
cell
summ

FD_YE_37_3, AnGL26 Batch1_genome_fasta/FD_YE_37_3 edit

243
351		45
174		25
13		988
5		050
0		42336923
1397 (33.0%)
16		10580
2088 (49.3%)
45		53
37 (0.9%)
17		4139
739 (17.5%)
2
dbcan
cell
summ

FD_YE_37_8_2, AnGL3 Batch1_genome_fasta/FD_YE_37_8_2 edit

187
372		31
113		31
14		8825
7		010
0		35744998
1020 (28.5%)
19		8180
1581 (44.2%)
40		25
22 (0.6%)
13		3211
610 (17.1%)
2
dbcan
cell
summ

FD_YE_37_9_2, AnGL4 Batch1_genome_fasta/FD_YE_37_9_2 edit

151
260		25
35		12
4		6212
4		230
0		33971951
437 (12.9%)
22		10170
1184 (34.9%)
31		39
27 (0.8%)
13		4440
825 (24.3%)
2
dbcan
cell
summ

FD-25-21, AnGL21 Batch2_genome_fasta/FD-25-21 edit

80
58		23
6		7
2		738
0		030
0		34862716
612 (17.6%)
18		10205
1270 (36.4%)
50		62
48 (1.4%)
20		4500
800 (22.9%)
2
GHCBMCEGTPLSLHAAcohesin#ProteinsSecMPTMTMHMM
dbcan
cell
summ

FD-MS-7-8, AnGL9 Batch2_genome_fasta/FD-MS-7-8 edit

138
161		66
104		28
13		9411
8		040
0		30764141
879 (28.6%)
16		7346
1335 (43.4%)
34		42
33 (1.1%)
17		3110
619 (20.1%)
2
dbcan
cell
summ

FD-YE-37-9-3, AnGL29 Batch2_genome_fasta/FD-YE-37-9-3 edit

151
260		25
35		12
4		6212
4		230
0		33971951
437 (12.9%)
22		10168
1184 (34.9%)
31		39
27 (0.8%)
13		4439
825 (24.3%)
2
dbcan
cell
summ

Maridesulfovibrio salexigens, AnGL23 Batch3_genome_fasta/FD-SO4-25-14 edit

51
15		11
3		6
5		970
0		030
0		38253347
752 (19.7%)
24		9557
1361 (35.6%)
37		43
33 (0.9%)
18		4203
805 (21.0%)
1
dbcan
cell
summ

Paraclostridium benzoelyticum, AnGL27 Batch2_genome_fasta/FD-LS-11-2 edit

69
58		19
8		12
16		640
0		020
0		35181582
366 (10.4%)
20		10560
1136 (32.3%)
32		45
32 (0.9%)
13		4851
843 (24.0%)
1
dbcan
cell
summ

Sunxiuqinia elliptica, AnGL22 Batch2_genome_fasta/FD-37-3-2 edit

243
351		45
174		25
13		988
5		050
0		42346914
1395 (32.9%)
16		10578
2087 (49.3%)
45		53
37 (0.9%)
17		4139
739 (17.5%)
2
dbcan
cell
summ

Terrisporobacter hibernicus, CB-LS-10-2 Batch4_genome_fasta/bc2038 edit

52
48		14
21		16
18		640
0		020
1		40801864
424 (10.4%)
19		11420
1278 (31.3%)
35		58
40 (1.0%)
11		5161
917 (22.5%)
1
GHCBMCEGTPLSLHAAcohesin#ProteinsSecMPTMTMHMM
dbcan
cell
summ

Terrisporobacter hibernicus, AnGL54 Batch2_genome_fasta/CB-LS-10-2 edit

53
48		14
21		17
18		650
0		020
1		47042074
476 (10.1%)
19		11730
1352 (28.7%)
35		61
42 (0.9%)
12		5342
964 (20.5%)
1

Cellulosome related (9)

126677325171646242252378155582126363037666
GHCBMCEGTPLSLHAAcohesin#ProteinsSecMPTMTMHMM
dbcan
cell
summ

Acetivibrio alkalicellulosi, DSM 17461 IMG: Gs0011839 edit

133
301		108
228		22
14		612
0		4412
87		43052913
669 (15.5%)
21		9420
1514 (35.2%)
33		32
23 (0.5%)
9		3811
860 (20.0%)
2
dbcan
cell
summ

Acetivibrio thermocellus, DSM 1313 NCBI:GCF_000184925.1 edit

108
202		86
151		18
11		705
0		528
46		30552012
463 (15.2%)
21		6489
1031 (33.7%)
28		30
21 (0.7%)
11		2700
613 (20.1%)
1
dbcan
cell
summ

Clostridium acetobutylicum, ATCC 824 NCBI:GCF_000008765.1 edit

127
200		44
114		22
29		1086
0		012
12		38862082
492 (12.7%)
20		9996
1237 (31.8%)
30		52
39 (1.0%)
15		4407
822 (21.2%)
1
dbcan
cell
summ

Clostridium acetobutylicum, DSM 1731 NCBI:GCF_000218855.1 edit

12844
114		22
29		1086
0		012
12		38812089
493 (12.7%)
20		10018
1237 (31.9%)
30		52
39 (1.0%)
15		4410
819 (21.1%)
1
dbcan
cell
summ

Paenibacillus guangzhouensis, KCTC 33171 NCBI:GCF_009363075.1 edit

242
458		98
180		48
35		1027
12		3101
67		62254523
985 (15.8%)
23		19209
2301 (37.0%)
45		81
52 (0.8%)
19		8364
1521 (24.4%)
1
dbcan
cell
summ

Pseudobacteroides cellulosolvens, DSM 2933 NCBI:GCF_001262605.1 edit

186
393		168
395		51
34		1015
2		11321
153		58814334
982 (16.7%)
21		12455
2049 (34.8%)
32		58
45 (0.8%)
14		5164
1153 (19.6%)
1
GHCBMCEGTPLSLHAAcohesin#ProteinsSecMPTMTMHMM
dbcan
cell
summ

Ruminiclostridium herbifermentans MA18, DSM 109966 NCBI:GCF_005473905.2 edit

122
275		87
164		28
14		715
0		106
72		37812214
508 (13.4%)
21		8176
1192 (31.5%)
31		63
41 (1.1%)
13		3309
688 (18.2%)
1
dbcan
cell
summ

Ruminococcus albus_7, DSM 20455 NCBI:GCF_000179635.2 edit

133
301		97
122		25
15		546
0		010
1		40422815
608 (15.0%)
16		7548
1284 (31.8%)
25		39
25 (0.6%)
9		3128
720 (17.8%)
1
dbcan
cell
summ

Ruminococcus callidus, ATCC 27760 NCBI:GCF_000468015.1 edit

87
158		41
68		15
8		414
0		000
3		27591682
382 (13.8%)
13		5476
791 (28.7%)
23		26
18 (0.7%)
11		2327
470 (17.0%)
1
to be added:
Missing genomes:
Mucilaginibacter sp. cycad4
Clostridium subgerminale CB-LS-10-1 ↑ Top




v4.26 @copyright 2025 UCLA