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Gene activity

Syntrophomonas wolfei saponavida · 1 genes
1
genes
1
KO-annotated
8
reactions
3
pathways

Activity by pathway — click to expand; ranked by genes involved

Fatty acid degradationMetabolism; Lipid metabolism1 genes · 8 rxns
Sws_00039 K07516 fadN R01975
(S)-3-Hydroxybutanoyl-CoA + NAD+ <=> Acetoacetyl-CoA + NADH + H+
(S)-3-hydroxybutanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R04737
(S)-3-Hydroxyhexadecanoyl-CoA + NAD+ <=> 3-Oxopalmitoyl-CoA + NADH + H+
(S)-3-hydroxyhexadecanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R04739
(S)-3-Hydroxytetradecanoyl-CoA + NAD+ <=> 3-Oxotetradecanoyl-CoA + NADH
(S)-3-hydroxytetradecanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R04741
(S)-3-Hydroxydodecanoyl-CoA + NAD+ <=> 3-Oxododecanoyl-CoA + NADH + H+
(S)-3-hydroxydodecanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R04743
(S)-Hydroxydecanoyl-CoA + NAD+ <=> 3-Oxodecanoyl-CoA + NADH + H+
(S)-hydroxydecanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R04745
(S)-3-Hydroxyoctanoyl-CoA + NAD+ <=> 3-Oxooctanoyl-CoA + NADH + H+
(S)-hydroxyoctanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R04748
(S)-Hydroxyhexanoyl-CoA + NAD+ <=> 3-Oxohexanoyl-CoA + NADH + H+
(S)-hydroxyhexanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R05305
3-Hydroxypimeloyl-CoA + NAD+ <=> 3-Oxopimeloyl-CoA + NADH + H+
3-hydroxypimeloyl-CoA:NAD+ oxidoreductase
Benzoate degradationMetabolism; Xenobiotics biodegradation and metabolism1 genes · 8 rxns
Sws_00039 K07516 fadN R01975
(S)-3-Hydroxybutanoyl-CoA + NAD+ <=> Acetoacetyl-CoA + NADH + H+
(S)-3-hydroxybutanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R04737
(S)-3-Hydroxyhexadecanoyl-CoA + NAD+ <=> 3-Oxopalmitoyl-CoA + NADH + H+
(S)-3-hydroxyhexadecanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R04739
(S)-3-Hydroxytetradecanoyl-CoA + NAD+ <=> 3-Oxotetradecanoyl-CoA + NADH
(S)-3-hydroxytetradecanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R04741
(S)-3-Hydroxydodecanoyl-CoA + NAD+ <=> 3-Oxododecanoyl-CoA + NADH + H+
(S)-3-hydroxydodecanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R04743
(S)-Hydroxydecanoyl-CoA + NAD+ <=> 3-Oxodecanoyl-CoA + NADH + H+
(S)-hydroxydecanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R04745
(S)-3-Hydroxyoctanoyl-CoA + NAD+ <=> 3-Oxooctanoyl-CoA + NADH + H+
(S)-hydroxyoctanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R04748
(S)-Hydroxyhexanoyl-CoA + NAD+ <=> 3-Oxohexanoyl-CoA + NADH + H+
(S)-hydroxyhexanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R05305
3-Hydroxypimeloyl-CoA + NAD+ <=> 3-Oxopimeloyl-CoA + NADH + H+
3-hydroxypimeloyl-CoA:NAD+ oxidoreductase
Butanoate metabolismMetabolism; Carbohydrate metabolism1 genes · 8 rxns
Sws_00039 K07516 fadN R01975
(S)-3-Hydroxybutanoyl-CoA + NAD+ <=> Acetoacetyl-CoA + NADH + H+
(S)-3-hydroxybutanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R04737
(S)-3-Hydroxyhexadecanoyl-CoA + NAD+ <=> 3-Oxopalmitoyl-CoA + NADH + H+
(S)-3-hydroxyhexadecanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R04739
(S)-3-Hydroxytetradecanoyl-CoA + NAD+ <=> 3-Oxotetradecanoyl-CoA + NADH
(S)-3-hydroxytetradecanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R04741
(S)-3-Hydroxydodecanoyl-CoA + NAD+ <=> 3-Oxododecanoyl-CoA + NADH + H+
(S)-3-hydroxydodecanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R04743
(S)-Hydroxydecanoyl-CoA + NAD+ <=> 3-Oxodecanoyl-CoA + NADH + H+
(S)-hydroxydecanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R04745
(S)-3-Hydroxyoctanoyl-CoA + NAD+ <=> 3-Oxooctanoyl-CoA + NADH + H+
(S)-hydroxyoctanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R04748
(S)-Hydroxyhexanoyl-CoA + NAD+ <=> 3-Oxohexanoyl-CoA + NADH + H+
(S)-hydroxyhexanoyl-CoA:NAD+ oxidoreductase
Sws_00039 K07516 fadN R05305
3-Hydroxypimeloyl-CoA + NAD+ <=> 3-Oxopimeloyl-CoA + NADH + H+
3-hydroxypimeloyl-CoA:NAD+ oxidoreductase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Sws_00039
Microbial metabolism in diverse environments 1 genes
Sws_00039
Carbon metabolism 1 genes
Sws_00039
Fatty acid metabolism 1 genes
Sws_00039

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Sws_00039 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN 1.1.1.35 R01975,R04737,R04739,R04741,R04743,R04745,R04748,R05305
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