Small Microbes Pathway Profiler

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◀ domain architecture  ·  operons  ·  ❔ guide

Gene activity

Syntrophomonas wolfei saponavida · 1 genes
1
genes
1
KO-annotated
2
reactions
2
pathways

Activity by pathway — click to expand; ranked by genes involved

Glyoxylate and dicarboxylate metabolismMetabolism; Carbohydrate metabolism1 genes · 2 rxns
Sws_03185 K01601 rbcL, cbbL R00024
D-Ribulose 1,5-bisphosphate + CO2 + H2O <=> 2 3-Phospho-D-glycerate
3-phospho-D-glycerate carboxy-lyase (dimerizing; D-ribulose-1,5-bisphosphate-forming)
Sws_03185 K01601 rbcL, cbbL R03140
D-Ribulose 1,5-bisphosphate + Oxygen <=> 3-Phospho-D-glycerate + 2-Phosphoglycolate
D-ribulose 1,5-bisphosphate oxygenase
Carbon fixation by Calvin cycleMetabolism; Energy metabolism1 genes · 2 rxns
Sws_03185 K01601 rbcL, cbbL R00024
D-Ribulose 1,5-bisphosphate + CO2 + H2O <=> 2 3-Phospho-D-glycerate
3-phospho-D-glycerate carboxy-lyase (dimerizing; D-ribulose-1,5-bisphosphate-forming)
Sws_03185 K01601 rbcL, cbbL R03140
D-Ribulose 1,5-bisphosphate + Oxygen <=> 3-Phospho-D-glycerate + 2-Phosphoglycolate
D-ribulose 1,5-bisphosphate oxygenase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Sws_03185
Microbial metabolism in diverse environments 1 genes
Sws_03185
Carbon metabolism 1 genes
Sws_03185

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Sws_03185 RuBisCO large subunit C-terminal-like domain-containing protein K01601 rbcL, cbbL 4.1.1.39 R00024,R03140
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