Small Microbes Pathway Profiler

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◀ domain architecture  ·  operons  ·  ❔ guide

Gene activity

Syntrophomonas palmitatica JCM14374 Spalm · 1 genes
1
genes
1
KO-annotated
2
reactions
5
pathways

Activity by pathway — click to expand; ranked by genes involved

Peptidoglycan biosynthesisMetabolism; Glycan biosynthesis and metabolism1 genes · 2 rxns
Spalm_01235 K01448 amiABC R04112
N-Acetylmuramoyl-Ala + H2O <=> N-Acetylmuramate + L-Alanine
N-acetylmuramoyl-Ala amidohydrolase
Spalm_01235 K01448 amiABC R05577
tRNA(Asp) + L-Aspartate + ATP <=> L-Aspartyl-tRNA(Asp) + Diphosphate + AMP
L-aspartate:tRNA(Asp) ligase (AMP-forming)
Aminoacyl-tRNA biosynthesisGenetic Information Processing; Translation1 genes · 2 rxns
Spalm_01235 K01448 amiABC R04112
N-Acetylmuramoyl-Ala + H2O <=> N-Acetylmuramate + L-Alanine
N-acetylmuramoyl-Ala amidohydrolase
Spalm_01235 K01448 amiABC R05577
tRNA(Asp) + L-Aspartate + ATP <=> L-Aspartyl-tRNA(Asp) + Diphosphate + AMP
L-aspartate:tRNA(Asp) ligase (AMP-forming)
Vancomycin resistanceHuman Diseases; Drug resistance: antimicrobial1 genes · 2 rxns
Spalm_01235 K01448 amiABC R04112
N-Acetylmuramoyl-Ala + H2O <=> N-Acetylmuramate + L-Alanine
N-acetylmuramoyl-Ala amidohydrolase
Spalm_01235 K01448 amiABC R05577
tRNA(Asp) + L-Aspartate + ATP <=> L-Aspartyl-tRNA(Asp) + Diphosphate + AMP
L-aspartate:tRNA(Asp) ligase (AMP-forming)
Cationic antimicrobial peptide (CAMP) resistanceHuman Diseases; Drug resistance: antimicrobial1 genes · 2 rxns
Spalm_01235 K01448 amiABC R04112
N-Acetylmuramoyl-Ala + H2O <=> N-Acetylmuramate + L-Alanine
N-acetylmuramoyl-Ala amidohydrolase
Spalm_01235 K01448 amiABC R05577
tRNA(Asp) + L-Aspartate + ATP <=> L-Aspartyl-tRNA(Asp) + Diphosphate + AMP
L-aspartate:tRNA(Asp) ligase (AMP-forming)
Two-component systemEnvironmental Information Processing; Signal transduction1 genes · 2 rxns
Spalm_01235 K01448 amiABC R04112
N-Acetylmuramoyl-Ala + H2O <=> N-Acetylmuramate + L-Alanine
N-acetylmuramoyl-Ala amidohydrolase
Spalm_01235 K01448 amiABC R05577
tRNA(Asp) + L-Aspartate + ATP <=> L-Aspartyl-tRNA(Asp) + Diphosphate + AMP
L-aspartate:tRNA(Asp) ligase (AMP-forming)

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Spalm_01235

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Spalm_01235 SH3 domain-containing protein K01448 amiABC; K01876 DARS2, aspS; K02395 flgJ; K07260 vanY; K11062 entD; K21472 lytH 3.4.17.14,3.5.1.28,6.1.1.12 R04112,R05577
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