Small Microbes Pathway Profiler

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Gene activity

Syntrophomonas palmitatica JCM14374 Spalm · 1 genes
1
genes
1
KO-annotated
3
reactions
2
pathways

Activity by pathway — click to expand; ranked by genes involved

Cysteine and methionine metabolismMetabolism; Amino acid metabolism1 genes · 3 rxns
Spalm_01565 K01738 cysK R00897
O-Acetyl-L-serine + Hydrogen sulfide <=> L-Cysteine + Acetate
O3-acetyl-L-serine:hydrogen-sulfide 2-amino-2-carboxyethyltransferase; O3-acetyl-L-serine acetate-lyase (adding hydrogen sulfide)
Spalm_01565 K01738 cysK R03601
O-Acetyl-L-serine + Hydrogen selenide <=> L-Selenocysteine + Acetate
O3-acetyl-L-serine acetate-lyase (adding hydrogen sulfide)
Spalm_01565 K01738 cysK R04859
O-Acetyl-L-serine + Thiosulfate + Thioredoxin + H+ <=> L-Cysteine + Sulfite + Thioredoxin disulfide + Acetate
O3-acetyl-L-serine:thiosulfate 2-amino-2-carboxyethyltransferase (reducing, L-cysteine-forming); O3-acetyl-L-serine acetate-lyase (thiosulfate-reducing, L-cysteine-forming)
Sulfur metabolismMetabolism; Energy metabolism1 genes · 3 rxns
Spalm_01565 K01738 cysK R00897
O-Acetyl-L-serine + Hydrogen sulfide <=> L-Cysteine + Acetate
O3-acetyl-L-serine:hydrogen-sulfide 2-amino-2-carboxyethyltransferase; O3-acetyl-L-serine acetate-lyase (adding hydrogen sulfide)
Spalm_01565 K01738 cysK R03601
O-Acetyl-L-serine + Hydrogen selenide <=> L-Selenocysteine + Acetate
O3-acetyl-L-serine acetate-lyase (adding hydrogen sulfide)
Spalm_01565 K01738 cysK R04859
O-Acetyl-L-serine + Thiosulfate + Thioredoxin + H+ <=> L-Cysteine + Sulfite + Thioredoxin disulfide + Acetate
O3-acetyl-L-serine:thiosulfate 2-amino-2-carboxyethyltransferase (reducing, L-cysteine-forming); O3-acetyl-L-serine acetate-lyase (thiosulfate-reducing, L-cysteine-forming)

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Spalm_01565
Biosynthesis of secondary metabolites 1 genes
Spalm_01565
Microbial metabolism in diverse environments 1 genes
Spalm_01565
Map 01130 1 genes
Spalm_01565
Carbon metabolism 1 genes
Spalm_01565
Biosynthesis of amino acids 1 genes
Spalm_01565

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Spalm_01565 cysteine synthase A K01738 cysK 2.5.1.47 R00897,R03601,R04859
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