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Gene activity

Syntrophomonas palmitatica JCM14374 Spalm · 1 genes
1
genes
1
KO-annotated
7
reactions
4
pathways

Activity by pathway — click to expand; ranked by genes involved

Purine metabolismMetabolism; Nucleotide metabolism1 genes · 7 rxns
Spalm_00296 K01589 purK R00256
L-Glutamine + H2O <=> L-Glutamate + Ammonia
L-glutamine amidohydrolase
Spalm_00296 K01589 purK R00575
2 ATP + L-Glutamine + HCO3- + H2O <=> 2 ADP + Orthophosphate + L-Glutamate + Carbamoyl phosphate
HCO3-:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating)
Spalm_00296 K01589 purK R01395
ATP + Carbamate <=> ADP + Carbamoyl phosphate
ATP:carbamate phosphotransferase
Spalm_00296 K01589 purK R07404
ATP + Aminoimidazole ribotide + HCO3- <=> ADP + Orthophosphate + 5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
5-amino-1-(5-phospho-D-ribosyl)imidazole:carbon-dioxide ligase (ADP-forming)
Spalm_00296 K01589 purK R10011
L-Lysine + (2R,3R)-3-Methylornithine + ATP <=> (2R,3R)-3-Methylornithinyl-N6-lysine + Products of ATP breakdown
Spalm_00296 K01589 purK R10948
ATP + HCO3- <=> ADP + Carboxyphosphate
ATP:HCO3- phosphotransferase
Spalm_00296 K01589 purK R10949
Ammonia + Carboxyphosphate <=> Carbamate + Orthophosphate
Pyrimidine metabolismMetabolism; Nucleotide metabolism1 genes · 7 rxns
Spalm_00296 K01589 purK R00256
L-Glutamine + H2O <=> L-Glutamate + Ammonia
L-glutamine amidohydrolase
Spalm_00296 K01589 purK R00575
2 ATP + L-Glutamine + HCO3- + H2O <=> 2 ADP + Orthophosphate + L-Glutamate + Carbamoyl phosphate
HCO3-:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating)
Spalm_00296 K01589 purK R01395
ATP + Carbamate <=> ADP + Carbamoyl phosphate
ATP:carbamate phosphotransferase
Spalm_00296 K01589 purK R07404
ATP + Aminoimidazole ribotide + HCO3- <=> ADP + Orthophosphate + 5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
5-amino-1-(5-phospho-D-ribosyl)imidazole:carbon-dioxide ligase (ADP-forming)
Spalm_00296 K01589 purK R10011
L-Lysine + (2R,3R)-3-Methylornithine + ATP <=> (2R,3R)-3-Methylornithinyl-N6-lysine + Products of ATP breakdown
Spalm_00296 K01589 purK R10948
ATP + HCO3- <=> ADP + Carboxyphosphate
ATP:HCO3- phosphotransferase
Spalm_00296 K01589 purK R10949
Ammonia + Carboxyphosphate <=> Carbamate + Orthophosphate
Alanine, aspartate and glutamate metabolismMetabolism; Amino acid metabolism1 genes · 7 rxns
Spalm_00296 K01589 purK R00256
L-Glutamine + H2O <=> L-Glutamate + Ammonia
L-glutamine amidohydrolase
Spalm_00296 K01589 purK R00575
2 ATP + L-Glutamine + HCO3- + H2O <=> 2 ADP + Orthophosphate + L-Glutamate + Carbamoyl phosphate
HCO3-:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating)
Spalm_00296 K01589 purK R01395
ATP + Carbamate <=> ADP + Carbamoyl phosphate
ATP:carbamate phosphotransferase
Spalm_00296 K01589 purK R07404
ATP + Aminoimidazole ribotide + HCO3- <=> ADP + Orthophosphate + 5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
5-amino-1-(5-phospho-D-ribosyl)imidazole:carbon-dioxide ligase (ADP-forming)
Spalm_00296 K01589 purK R10011
L-Lysine + (2R,3R)-3-Methylornithine + ATP <=> (2R,3R)-3-Methylornithinyl-N6-lysine + Products of ATP breakdown
Spalm_00296 K01589 purK R10948
ATP + HCO3- <=> ADP + Carboxyphosphate
ATP:HCO3- phosphotransferase
Spalm_00296 K01589 purK R10949
Ammonia + Carboxyphosphate <=> Carbamate + Orthophosphate
Lysine biosynthesisMetabolism; Amino acid metabolism1 genes · 7 rxns
Spalm_00296 K01589 purK R00256
L-Glutamine + H2O <=> L-Glutamate + Ammonia
L-glutamine amidohydrolase
Spalm_00296 K01589 purK R00575
2 ATP + L-Glutamine + HCO3- + H2O <=> 2 ADP + Orthophosphate + L-Glutamate + Carbamoyl phosphate
HCO3-:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating)
Spalm_00296 K01589 purK R01395
ATP + Carbamate <=> ADP + Carbamoyl phosphate
ATP:carbamate phosphotransferase
Spalm_00296 K01589 purK R07404
ATP + Aminoimidazole ribotide + HCO3- <=> ADP + Orthophosphate + 5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
5-amino-1-(5-phospho-D-ribosyl)imidazole:carbon-dioxide ligase (ADP-forming)
Spalm_00296 K01589 purK R10011
L-Lysine + (2R,3R)-3-Methylornithine + ATP <=> (2R,3R)-3-Methylornithinyl-N6-lysine + Products of ATP breakdown
Spalm_00296 K01589 purK R10948
ATP + HCO3- <=> ADP + Carboxyphosphate
ATP:HCO3- phosphotransferase
Spalm_00296 K01589 purK R10949
Ammonia + Carboxyphosphate <=> Carbamate + Orthophosphate

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Spalm_00296
Biosynthesis of secondary metabolites 1 genes
Spalm_00296
Microbial metabolism in diverse environments 1 genes
Spalm_00296
Map 01130 1 genes
Spalm_00296

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Spalm_00296 ATP-grasp domain-containing protein K01589 purK; K01955 carB, CPA2; K16181 pylC 6.3.4.18,6.3.5.5 R00256,R00575,R01395,R07404,R10011,R10948,R10949
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