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Gene activity

Syntrophomonas zehnderi OL-4 Szehn · 1 genes
1
genes
1
KO-annotated
4
reactions
10
pathways

Activity by pathway — click to expand; ranked by genes involved

Fatty acid biosynthesisMetabolism; Lipid metabolism1 genes · 4 rxns
Szeh_01216 K01897 ACSL, fadD R01280
ATP + Hexadecanoic acid + CoA <=> AMP + Palmitoyl-CoA + Diphosphate
palmitate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01406
ATP + Long-chain fatty acid + Acyl-carrier protein <=> AMP + Diphosphate + Long-chain acyl-[acyl-carrier protein]
long-chain-fatty-acid:[acyl-carrier-protein] ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01558
ATP + Oxalate + CoA <=> AMP + Diphosphate + Oxalyl-CoA
oxalate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R04864
Acyl-[acyl-carrier protein] + 2-Acyl-sn-glycero-3-phosphoethanolamine <=> Acyl-carrier protein + Phosphatidylethanolamine
2-acyl-sn-glycero-3-phosphoethanolamine O-acyltransferase
Fatty acid degradationMetabolism; Lipid metabolism1 genes · 4 rxns
Szeh_01216 K01897 ACSL, fadD R01280
ATP + Hexadecanoic acid + CoA <=> AMP + Palmitoyl-CoA + Diphosphate
palmitate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01406
ATP + Long-chain fatty acid + Acyl-carrier protein <=> AMP + Diphosphate + Long-chain acyl-[acyl-carrier protein]
long-chain-fatty-acid:[acyl-carrier-protein] ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01558
ATP + Oxalate + CoA <=> AMP + Diphosphate + Oxalyl-CoA
oxalate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R04864
Acyl-[acyl-carrier protein] + 2-Acyl-sn-glycero-3-phosphoethanolamine <=> Acyl-carrier protein + Phosphatidylethanolamine
2-acyl-sn-glycero-3-phosphoethanolamine O-acyltransferase
Glycerophospholipid metabolismMetabolism; Lipid metabolism1 genes · 4 rxns
Szeh_01216 K01897 ACSL, fadD R01280
ATP + Hexadecanoic acid + CoA <=> AMP + Palmitoyl-CoA + Diphosphate
palmitate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01406
ATP + Long-chain fatty acid + Acyl-carrier protein <=> AMP + Diphosphate + Long-chain acyl-[acyl-carrier protein]
long-chain-fatty-acid:[acyl-carrier-protein] ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01558
ATP + Oxalate + CoA <=> AMP + Diphosphate + Oxalyl-CoA
oxalate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R04864
Acyl-[acyl-carrier protein] + 2-Acyl-sn-glycero-3-phosphoethanolamine <=> Acyl-carrier protein + Phosphatidylethanolamine
2-acyl-sn-glycero-3-phosphoethanolamine O-acyltransferase
Glyoxylate and dicarboxylate metabolismMetabolism; Carbohydrate metabolism1 genes · 4 rxns
Szeh_01216 K01897 ACSL, fadD R01280
ATP + Hexadecanoic acid + CoA <=> AMP + Palmitoyl-CoA + Diphosphate
palmitate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01406
ATP + Long-chain fatty acid + Acyl-carrier protein <=> AMP + Diphosphate + Long-chain acyl-[acyl-carrier protein]
long-chain-fatty-acid:[acyl-carrier-protein] ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01558
ATP + Oxalate + CoA <=> AMP + Diphosphate + Oxalyl-CoA
oxalate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R04864
Acyl-[acyl-carrier protein] + 2-Acyl-sn-glycero-3-phosphoethanolamine <=> Acyl-carrier protein + Phosphatidylethanolamine
2-acyl-sn-glycero-3-phosphoethanolamine O-acyltransferase
Quorum sensingCellular Processes; Cellular community - prokaryotes1 genes · 4 rxns
Szeh_01216 K01897 ACSL, fadD R01280
ATP + Hexadecanoic acid + CoA <=> AMP + Palmitoyl-CoA + Diphosphate
palmitate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01406
ATP + Long-chain fatty acid + Acyl-carrier protein <=> AMP + Diphosphate + Long-chain acyl-[acyl-carrier protein]
long-chain-fatty-acid:[acyl-carrier-protein] ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01558
ATP + Oxalate + CoA <=> AMP + Diphosphate + Oxalyl-CoA
oxalate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R04864
Acyl-[acyl-carrier protein] + 2-Acyl-sn-glycero-3-phosphoethanolamine <=> Acyl-carrier protein + Phosphatidylethanolamine
2-acyl-sn-glycero-3-phosphoethanolamine O-acyltransferase
PPAR signaling pathwayOrganismal Systems; Endocrine system1 genes · 4 rxns
Szeh_01216 K01897 ACSL, fadD R01280
ATP + Hexadecanoic acid + CoA <=> AMP + Palmitoyl-CoA + Diphosphate
palmitate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01406
ATP + Long-chain fatty acid + Acyl-carrier protein <=> AMP + Diphosphate + Long-chain acyl-[acyl-carrier protein]
long-chain-fatty-acid:[acyl-carrier-protein] ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01558
ATP + Oxalate + CoA <=> AMP + Diphosphate + Oxalyl-CoA
oxalate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R04864
Acyl-[acyl-carrier protein] + 2-Acyl-sn-glycero-3-phosphoethanolamine <=> Acyl-carrier protein + Phosphatidylethanolamine
2-acyl-sn-glycero-3-phosphoethanolamine O-acyltransferase
PeroxisomeCellular Processes; Transport and catabolism1 genes · 4 rxns
Szeh_01216 K01897 ACSL, fadD R01280
ATP + Hexadecanoic acid + CoA <=> AMP + Palmitoyl-CoA + Diphosphate
palmitate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01406
ATP + Long-chain fatty acid + Acyl-carrier protein <=> AMP + Diphosphate + Long-chain acyl-[acyl-carrier protein]
long-chain-fatty-acid:[acyl-carrier-protein] ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01558
ATP + Oxalate + CoA <=> AMP + Diphosphate + Oxalyl-CoA
oxalate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R04864
Acyl-[acyl-carrier protein] + 2-Acyl-sn-glycero-3-phosphoethanolamine <=> Acyl-carrier protein + Phosphatidylethanolamine
2-acyl-sn-glycero-3-phosphoethanolamine O-acyltransferase
FerroptosisCellular Processes; Cell growth and death1 genes · 4 rxns
Szeh_01216 K01897 ACSL, fadD R01280
ATP + Hexadecanoic acid + CoA <=> AMP + Palmitoyl-CoA + Diphosphate
palmitate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01406
ATP + Long-chain fatty acid + Acyl-carrier protein <=> AMP + Diphosphate + Long-chain acyl-[acyl-carrier protein]
long-chain-fatty-acid:[acyl-carrier-protein] ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01558
ATP + Oxalate + CoA <=> AMP + Diphosphate + Oxalyl-CoA
oxalate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R04864
Acyl-[acyl-carrier protein] + 2-Acyl-sn-glycero-3-phosphoethanolamine <=> Acyl-carrier protein + Phosphatidylethanolamine
2-acyl-sn-glycero-3-phosphoethanolamine O-acyltransferase
ThermogenesisOrganismal Systems; Environmental adaptation1 genes · 4 rxns
Szeh_01216 K01897 ACSL, fadD R01280
ATP + Hexadecanoic acid + CoA <=> AMP + Palmitoyl-CoA + Diphosphate
palmitate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01406
ATP + Long-chain fatty acid + Acyl-carrier protein <=> AMP + Diphosphate + Long-chain acyl-[acyl-carrier protein]
long-chain-fatty-acid:[acyl-carrier-protein] ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01558
ATP + Oxalate + CoA <=> AMP + Diphosphate + Oxalyl-CoA
oxalate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R04864
Acyl-[acyl-carrier protein] + 2-Acyl-sn-glycero-3-phosphoethanolamine <=> Acyl-carrier protein + Phosphatidylethanolamine
2-acyl-sn-glycero-3-phosphoethanolamine O-acyltransferase
Adipocytokine signaling pathwayOrganismal Systems; Endocrine system1 genes · 4 rxns
Szeh_01216 K01897 ACSL, fadD R01280
ATP + Hexadecanoic acid + CoA <=> AMP + Palmitoyl-CoA + Diphosphate
palmitate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01406
ATP + Long-chain fatty acid + Acyl-carrier protein <=> AMP + Diphosphate + Long-chain acyl-[acyl-carrier protein]
long-chain-fatty-acid:[acyl-carrier-protein] ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R01558
ATP + Oxalate + CoA <=> AMP + Diphosphate + Oxalyl-CoA
oxalate:CoA ligase (AMP-forming)
Szeh_01216 K01897 ACSL, fadD R04864
Acyl-[acyl-carrier protein] + 2-Acyl-sn-glycero-3-phosphoethanolamine <=> Acyl-carrier protein + Phosphatidylethanolamine
2-acyl-sn-glycero-3-phosphoethanolamine O-acyltransferase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Szeh_01216
Fatty acid metabolism 1 genes
Szeh_01216

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Szeh_01216 class I adenylate-forming enzyme family protein K01897 ACSL, fadD; K02182 caiC; K05939 aas; K22133 AAE3 2.3.1.40,6.2.1.20,6.2.1.3,6.2.1.48,6.2.1.8 R01280,R01406,R01558,R04864
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