Small Microbes Pathway Profiler

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Gene activity

Syntrophomonas wolfei methylbutyratica 4J5 · 1 genes
1
genes
1
KO-annotated
3
reactions
4
pathways

Activity by pathway — click to expand; ranked by genes involved

Citrate cycle (TCA cycle)Metabolism; Carbohydrate metabolism1 genes · 3 rxns
Swm_00417 K00031 IDH1, IDH2, icd, IDP R00267
Isocitrate + NADP+ <=> 2-Oxoglutarate + CO2 + NADPH + H+
isocitrate:NADP+ oxidoreductase (decarboxylating)
Swm_00417 K00031 IDH1, IDH2, icd, IDP R00268
Oxalosuccinate <=> 2-Oxoglutarate + CO2
oxalosuccinate carboxy-lyase (2-oxoglutarate-forming)
Swm_00417 K00031 IDH1, IDH2, icd, IDP R01899
Isocitrate + NADP+ <=> Oxalosuccinate + NADPH + H+
isocitrate:NADP+ oxidoreductase
Glutathione metabolismMetabolism; Metabolism of other amino acids1 genes · 3 rxns
Swm_00417 K00031 IDH1, IDH2, icd, IDP R00267
Isocitrate + NADP+ <=> 2-Oxoglutarate + CO2 + NADPH + H+
isocitrate:NADP+ oxidoreductase (decarboxylating)
Swm_00417 K00031 IDH1, IDH2, icd, IDP R00268
Oxalosuccinate <=> 2-Oxoglutarate + CO2
oxalosuccinate carboxy-lyase (2-oxoglutarate-forming)
Swm_00417 K00031 IDH1, IDH2, icd, IDP R01899
Isocitrate + NADP+ <=> Oxalosuccinate + NADPH + H+
isocitrate:NADP+ oxidoreductase
Other carbon fixation pathwaysMetabolism; Energy metabolism1 genes · 3 rxns
Swm_00417 K00031 IDH1, IDH2, icd, IDP R00267
Isocitrate + NADP+ <=> 2-Oxoglutarate + CO2 + NADPH + H+
isocitrate:NADP+ oxidoreductase (decarboxylating)
Swm_00417 K00031 IDH1, IDH2, icd, IDP R00268
Oxalosuccinate <=> 2-Oxoglutarate + CO2
oxalosuccinate carboxy-lyase (2-oxoglutarate-forming)
Swm_00417 K00031 IDH1, IDH2, icd, IDP R01899
Isocitrate + NADP+ <=> Oxalosuccinate + NADPH + H+
isocitrate:NADP+ oxidoreductase
PeroxisomeCellular Processes; Transport and catabolism1 genes · 3 rxns
Swm_00417 K00031 IDH1, IDH2, icd, IDP R00267
Isocitrate + NADP+ <=> 2-Oxoglutarate + CO2 + NADPH + H+
isocitrate:NADP+ oxidoreductase (decarboxylating)
Swm_00417 K00031 IDH1, IDH2, icd, IDP R00268
Oxalosuccinate <=> 2-Oxoglutarate + CO2
oxalosuccinate carboxy-lyase (2-oxoglutarate-forming)
Swm_00417 K00031 IDH1, IDH2, icd, IDP R01899
Isocitrate + NADP+ <=> Oxalosuccinate + NADPH + H+
isocitrate:NADP+ oxidoreductase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Swm_00417
Biosynthesis of secondary metabolites 1 genes
Swm_00417
Microbial metabolism in diverse environments 1 genes
Swm_00417
Map 01130 1 genes
Swm_00417
Carbon metabolism 1 genes
Swm_00417
2-Oxocarboxylic acid metabolism 1 genes
Swm_00417
Biosynthesis of amino acids 1 genes
Swm_00417

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Swm_00417 NADP-dependent isocitrate dehydrogenase K00031 IDH1, IDH2, icd, IDP 1.1.1.42 R00267,R00268,R01899
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