Small Microbes Pathway Profiler

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◀ domain architecture  ·  operons  ·  ❔ guide

Gene activity

Syntrophomonas wolfei methylbutyratica 4J5 · 1 genes
1
genes
1
KO-annotated
3
reactions
1
pathways

Activity by pathway — click to expand; ranked by genes involved

Terpenoid backbone biosynthesisMetabolism; Metabolism of terpenoids and polyketides1 genes · 3 rxns
Swm_00587 K13789 GGPS R01658
Dimethylallyl diphosphate + Isopentenyl diphosphate <=> Diphosphate + Geranyl diphosphate
dimethylallyl-diphosphate:isopentenyl-diphosphate dimethylallyltranstransferase
Swm_00587 K13789 GGPS R02003
Geranyl diphosphate + Isopentenyl diphosphate <=> Diphosphate + trans,trans-Farnesyl diphosphate
geranyl-diphosphate:isopentenyl-diphosphate geranyltrans-transferase
Swm_00587 K13789 GGPS R02061
trans,trans-Farnesyl diphosphate + Isopentenyl diphosphate <=> Diphosphate + Geranylgeranyl diphosphate
trans,trans-farnesyl-diphosphate:isopentenyl-diphosphate farnesyltranstransferase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Swm_00587
Biosynthesis of secondary metabolites 1 genes
Swm_00587
Map 01130 1 genes
Swm_00587

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Swm_00587 polyprenyl synthetase family protein K13789 GGPS 2.5.1.1,2.5.1.10,2.5.1.29 R01658,R02003,R02061
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