Small Microbes Pathway Profiler

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Nitrogen Fixation CANT-Hyd
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Gene activity

Syntrophomonas wolfei methylbutyratica 4J5 · 1 genes
1
genes
1
KO-annotated
3
reactions
6
pathways

Activity by pathway — click to expand; ranked by genes involved

Pentose and glucuronate interconversionsMetabolism; Carbohydrate metabolism1 genes · 3 rxns
Swm_00651 K00012 UGDH, ugd R00286
UDP-glucose + H2O + 2 NAD+ <=> UDP-glucuronate + 2 NADH + 2 H+
UDP-glucose:NAD+ 6-oxidoreductase
Swm_00651 K00012 UGDH, ugd R00880
GDP-mannose + H2O + 2 NAD+ <=> GDP-D-mannuronate + 2 NADH + 2 H+
GDP-D-mannose:NAD+ 6-oxidoreductase
Swm_00651 K00012 UGDH, ugd R03317
UDP-N-acetyl-D-mannosamine + 2 NAD+ + H2O <=> UDP-N-acetyl-D-mannosaminouronate + 2 NADH + 2 H+
UDP-N-acetyl-alpha-D-mannosamine:NAD+ 6-oxidoreductase
Fructose and mannose metabolismMetabolism; Carbohydrate metabolism1 genes · 3 rxns
Swm_00651 K00012 UGDH, ugd R00286
UDP-glucose + H2O + 2 NAD+ <=> UDP-glucuronate + 2 NADH + 2 H+
UDP-glucose:NAD+ 6-oxidoreductase
Swm_00651 K00012 UGDH, ugd R00880
GDP-mannose + H2O + 2 NAD+ <=> GDP-D-mannuronate + 2 NADH + 2 H+
GDP-D-mannose:NAD+ 6-oxidoreductase
Swm_00651 K00012 UGDH, ugd R03317
UDP-N-acetyl-D-mannosamine + 2 NAD+ + H2O <=> UDP-N-acetyl-D-mannosaminouronate + 2 NADH + 2 H+
UDP-N-acetyl-alpha-D-mannosamine:NAD+ 6-oxidoreductase
Ascorbate and aldarate metabolismMetabolism; Carbohydrate metabolism1 genes · 3 rxns
Swm_00651 K00012 UGDH, ugd R00286
UDP-glucose + H2O + 2 NAD+ <=> UDP-glucuronate + 2 NADH + 2 H+
UDP-glucose:NAD+ 6-oxidoreductase
Swm_00651 K00012 UGDH, ugd R00880
GDP-mannose + H2O + 2 NAD+ <=> GDP-D-mannuronate + 2 NADH + 2 H+
GDP-D-mannose:NAD+ 6-oxidoreductase
Swm_00651 K00012 UGDH, ugd R03317
UDP-N-acetyl-D-mannosamine + 2 NAD+ + H2O <=> UDP-N-acetyl-D-mannosaminouronate + 2 NADH + 2 H+
UDP-N-acetyl-alpha-D-mannosamine:NAD+ 6-oxidoreductase
Amino sugar and nucleotide sugar metabolismMetabolism; Glycan biosynthesis and metabolism1 genes · 3 rxns
Swm_00651 K00012 UGDH, ugd R00286
UDP-glucose + H2O + 2 NAD+ <=> UDP-glucuronate + 2 NADH + 2 H+
UDP-glucose:NAD+ 6-oxidoreductase
Swm_00651 K00012 UGDH, ugd R00880
GDP-mannose + H2O + 2 NAD+ <=> GDP-D-mannuronate + 2 NADH + 2 H+
GDP-D-mannose:NAD+ 6-oxidoreductase
Swm_00651 K00012 UGDH, ugd R03317
UDP-N-acetyl-D-mannosamine + 2 NAD+ + H2O <=> UDP-N-acetyl-D-mannosaminouronate + 2 NADH + 2 H+
UDP-N-acetyl-alpha-D-mannosamine:NAD+ 6-oxidoreductase
Two-component systemEnvironmental Information Processing; Signal transduction1 genes · 3 rxns
Swm_00651 K00012 UGDH, ugd R00286
UDP-glucose + H2O + 2 NAD+ <=> UDP-glucuronate + 2 NADH + 2 H+
UDP-glucose:NAD+ 6-oxidoreductase
Swm_00651 K00012 UGDH, ugd R00880
GDP-mannose + H2O + 2 NAD+ <=> GDP-D-mannuronate + 2 NADH + 2 H+
GDP-D-mannose:NAD+ 6-oxidoreductase
Swm_00651 K00012 UGDH, ugd R03317
UDP-N-acetyl-D-mannosamine + 2 NAD+ + H2O <=> UDP-N-acetyl-D-mannosaminouronate + 2 NADH + 2 H+
UDP-N-acetyl-alpha-D-mannosamine:NAD+ 6-oxidoreductase
Biofilm formation - Vibrio choleraeCellular Processes; Cellular community - prokaryotes1 genes · 3 rxns
Swm_00651 K00012 UGDH, ugd R00286
UDP-glucose + H2O + 2 NAD+ <=> UDP-glucuronate + 2 NADH + 2 H+
UDP-glucose:NAD+ 6-oxidoreductase
Swm_00651 K00012 UGDH, ugd R00880
GDP-mannose + H2O + 2 NAD+ <=> GDP-D-mannuronate + 2 NADH + 2 H+
GDP-D-mannose:NAD+ 6-oxidoreductase
Swm_00651 K00012 UGDH, ugd R03317
UDP-N-acetyl-D-mannosamine + 2 NAD+ + H2O <=> UDP-N-acetyl-D-mannosaminouronate + 2 NADH + 2 H+
UDP-N-acetyl-alpha-D-mannosamine:NAD+ 6-oxidoreductase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Swm_00651

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Swm_00651 nucleotide sugar dehydrogenase K00012 UGDH, ugd; K00066 algD; K02472 wecC 1.1.1.132,1.1.1.22,1.1.1.336 R00286,R00880,R03317
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