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Gene activity

Syntrophomonas wolfei methylbutyratica 4J5 · 1 genes
1
genes
1
KO-annotated
3
reactions
6
pathways

Activity by pathway — click to expand; ranked by genes involved

Galactose metabolismMetabolism; Carbohydrate metabolism1 genes · 3 rxns
Swm_00652 K01710 rfbB, rmlB, rffG R00291
UDP-glucose <=> UDP-alpha-D-galactose
UDP-glucose 4-epimerase; UDP-alpha-D-glucose 4-epimerase
Swm_00652 K01710 rfbB, rmlB, rffG R02984
dTDP-glucose <=> dTDP-galactose
dTDPglucose 4-epimerase
Swm_00652 K01710 rfbB, rmlB, rffG R06513
dTDP-glucose <=> dTDP-4-oxo-6-deoxy-D-glucose + H2O
dTDPglucose 4,6-hydro-lyase
Amino sugar and nucleotide sugar metabolismMetabolism; Glycan biosynthesis and metabolism1 genes · 3 rxns
Swm_00652 K01710 rfbB, rmlB, rffG R00291
UDP-glucose <=> UDP-alpha-D-galactose
UDP-glucose 4-epimerase; UDP-alpha-D-glucose 4-epimerase
Swm_00652 K01710 rfbB, rmlB, rffG R02984
dTDP-glucose <=> dTDP-galactose
dTDPglucose 4-epimerase
Swm_00652 K01710 rfbB, rmlB, rffG R06513
dTDP-glucose <=> dTDP-4-oxo-6-deoxy-D-glucose + H2O
dTDPglucose 4,6-hydro-lyase
Streptomycin biosynthesisMetabolism; Biosynthesis of other secondary metabolites1 genes · 3 rxns
Swm_00652 K01710 rfbB, rmlB, rffG R00291
UDP-glucose <=> UDP-alpha-D-galactose
UDP-glucose 4-epimerase; UDP-alpha-D-glucose 4-epimerase
Swm_00652 K01710 rfbB, rmlB, rffG R02984
dTDP-glucose <=> dTDP-galactose
dTDPglucose 4-epimerase
Swm_00652 K01710 rfbB, rmlB, rffG R06513
dTDP-glucose <=> dTDP-4-oxo-6-deoxy-D-glucose + H2O
dTDPglucose 4,6-hydro-lyase
Polyketide sugar unit biosynthesisMetabolism; Metabolism of terpenoids and polyketides1 genes · 3 rxns
Swm_00652 K01710 rfbB, rmlB, rffG R00291
UDP-glucose <=> UDP-alpha-D-galactose
UDP-glucose 4-epimerase; UDP-alpha-D-glucose 4-epimerase
Swm_00652 K01710 rfbB, rmlB, rffG R02984
dTDP-glucose <=> dTDP-galactose
dTDPglucose 4-epimerase
Swm_00652 K01710 rfbB, rmlB, rffG R06513
dTDP-glucose <=> dTDP-4-oxo-6-deoxy-D-glucose + H2O
dTDPglucose 4,6-hydro-lyase
Acarbose and validamycin biosynthesisMetabolism; Biosynthesis of other secondary metabolites1 genes · 3 rxns
Swm_00652 K01710 rfbB, rmlB, rffG R00291
UDP-glucose <=> UDP-alpha-D-galactose
UDP-glucose 4-epimerase; UDP-alpha-D-glucose 4-epimerase
Swm_00652 K01710 rfbB, rmlB, rffG R02984
dTDP-glucose <=> dTDP-galactose
dTDPglucose 4-epimerase
Swm_00652 K01710 rfbB, rmlB, rffG R06513
dTDP-glucose <=> dTDP-4-oxo-6-deoxy-D-glucose + H2O
dTDPglucose 4,6-hydro-lyase
Biosynthesis of vancomycin group antibioticsMetabolism; Metabolism of terpenoids and polyketides1 genes · 3 rxns
Swm_00652 K01710 rfbB, rmlB, rffG R00291
UDP-glucose <=> UDP-alpha-D-galactose
UDP-glucose 4-epimerase; UDP-alpha-D-glucose 4-epimerase
Swm_00652 K01710 rfbB, rmlB, rffG R02984
dTDP-glucose <=> dTDP-galactose
dTDPglucose 4-epimerase
Swm_00652 K01710 rfbB, rmlB, rffG R06513
dTDP-glucose <=> dTDP-4-oxo-6-deoxy-D-glucose + H2O
dTDPglucose 4,6-hydro-lyase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Swm_00652
Map 01130 1 genes
Swm_00652

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Swm_00652 NAD-dependent epimerase/dehydratase family protein K01710 rfbB, rmlB, rffG; K01784 galE, GALE 4.2.1.46,5.1.3.2 R00291,R02984,R06513
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