Small Microbes Pathway Profiler

Domain Counts
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◀ domain architecture  ·  operons  ·  ❔ guide

Gene activity

Syntrophomonas wolfei methylbutyratica 4J5 · 1 genes
1
genes
1
KO-annotated
6
reactions
3
pathways

Activity by pathway — click to expand; ranked by genes involved

Ubiquinone and other terpenoid-quinone biosynthesisMetabolism; Metabolism of cofactors and vitamins1 genes · 6 rxns
Swm_00715 K03186 ubiX, bsdB, PAD1 R01238
4-Hydroxybenzoate <=> Phenol + CO2
4-hydroxybenzoate carboxy-lyase (phenol-forming)
Swm_00715 K03186 ubiX, bsdB, PAD1 R02952
4-Coumarate <=> 4-Hydroxystyrene + CO2
phenylacrylic acid decarboxylase
Swm_00715 K03186 ubiX, bsdB, PAD1 R03367
Caffeate <=> 3,4-Dihydroxystyrene + CO2
Swm_00715 K03186 ubiX, bsdB, PAD1 R04985
2-Polyprenylphenol + CO2 <=> 4-Hydroxy-3-polyprenylbenzoate
4-hydroxy-3-polyprenylbenzoate carboxy-lyase
Swm_00715 K03186 ubiX, bsdB, PAD1 R04986
3-Octaprenyl-4-hydroxybenzoate <=> 2-Octaprenylphenol + CO2
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
Swm_00715 K03186 ubiX, bsdB, PAD1 R11225
Dimethylallyl phosphate + Reduced FMN <=> Prenylated FMNH2 + Orthophosphate
dimethylallyl-phosphate:FMNH2 prenyltransferase
Aminobenzoate degradationMetabolism; Xenobiotics biodegradation and metabolism1 genes · 6 rxns
Swm_00715 K03186 ubiX, bsdB, PAD1 R01238
4-Hydroxybenzoate <=> Phenol + CO2
4-hydroxybenzoate carboxy-lyase (phenol-forming)
Swm_00715 K03186 ubiX, bsdB, PAD1 R02952
4-Coumarate <=> 4-Hydroxystyrene + CO2
phenylacrylic acid decarboxylase
Swm_00715 K03186 ubiX, bsdB, PAD1 R03367
Caffeate <=> 3,4-Dihydroxystyrene + CO2
Swm_00715 K03186 ubiX, bsdB, PAD1 R04985
2-Polyprenylphenol + CO2 <=> 4-Hydroxy-3-polyprenylbenzoate
4-hydroxy-3-polyprenylbenzoate carboxy-lyase
Swm_00715 K03186 ubiX, bsdB, PAD1 R04986
3-Octaprenyl-4-hydroxybenzoate <=> 2-Octaprenylphenol + CO2
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
Swm_00715 K03186 ubiX, bsdB, PAD1 R11225
Dimethylallyl phosphate + Reduced FMN <=> Prenylated FMNH2 + Orthophosphate
dimethylallyl-phosphate:FMNH2 prenyltransferase
Phenylpropanoid biosynthesisMetabolism; Biosynthesis of other secondary metabolites1 genes · 6 rxns
Swm_00715 K03186 ubiX, bsdB, PAD1 R01238
4-Hydroxybenzoate <=> Phenol + CO2
4-hydroxybenzoate carboxy-lyase (phenol-forming)
Swm_00715 K03186 ubiX, bsdB, PAD1 R02952
4-Coumarate <=> 4-Hydroxystyrene + CO2
phenylacrylic acid decarboxylase
Swm_00715 K03186 ubiX, bsdB, PAD1 R03367
Caffeate <=> 3,4-Dihydroxystyrene + CO2
Swm_00715 K03186 ubiX, bsdB, PAD1 R04985
2-Polyprenylphenol + CO2 <=> 4-Hydroxy-3-polyprenylbenzoate
4-hydroxy-3-polyprenylbenzoate carboxy-lyase
Swm_00715 K03186 ubiX, bsdB, PAD1 R04986
3-Octaprenyl-4-hydroxybenzoate <=> 2-Octaprenylphenol + CO2
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
Swm_00715 K03186 ubiX, bsdB, PAD1 R11225
Dimethylallyl phosphate + Reduced FMN <=> Prenylated FMNH2 + Orthophosphate
dimethylallyl-phosphate:FMNH2 prenyltransferase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Swm_00715
Biosynthesis of secondary metabolites 1 genes
Swm_00715
Microbial metabolism in diverse environments 1 genes
Swm_00715
Degradation of aromatic compounds 1 genes
Swm_00715

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Swm_00715 UbiX family flavin prenyltransferase K03186 ubiX, bsdB, PAD1 2.5.1.129 R01238,R02952,R03367,R04985,R04986,R11225
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