Small Microbes Pathway Profiler

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Gene activity

Syntrophomonas wolfei methylbutyratica 4J5 · 1 genes
1
genes
1
KO-annotated
2
reactions
4
pathways

Activity by pathway — click to expand; ranked by genes involved

Citrate cycle (TCA cycle)Metabolism; Carbohydrate metabolism1 genes · 2 rxns
Swm_01849 K01678 E4.2.1.2AB, fumB R00339
(R,R)-Tartaric acid <=> Oxaloacetate + H2O
(R,R)-tartrate hydro-lyase (oxaloacetate-forming)
Swm_01849 K01678 E4.2.1.2AB, fumB R01082
(S)-Malate <=> Fumarate + H2O
(S)-malate hydro-lyase (fumarate-forming)
Pyruvate metabolismMetabolism; Carbohydrate metabolism1 genes · 2 rxns
Swm_01849 K01678 E4.2.1.2AB, fumB R00339
(R,R)-Tartaric acid <=> Oxaloacetate + H2O
(R,R)-tartrate hydro-lyase (oxaloacetate-forming)
Swm_01849 K01678 E4.2.1.2AB, fumB R01082
(S)-Malate <=> Fumarate + H2O
(S)-malate hydro-lyase (fumarate-forming)
Glyoxylate and dicarboxylate metabolismMetabolism; Carbohydrate metabolism1 genes · 2 rxns
Swm_01849 K01678 E4.2.1.2AB, fumB R00339
(R,R)-Tartaric acid <=> Oxaloacetate + H2O
(R,R)-tartrate hydro-lyase (oxaloacetate-forming)
Swm_01849 K01678 E4.2.1.2AB, fumB R01082
(S)-Malate <=> Fumarate + H2O
(S)-malate hydro-lyase (fumarate-forming)
Other carbon fixation pathwaysMetabolism; Energy metabolism1 genes · 2 rxns
Swm_01849 K01678 E4.2.1.2AB, fumB R00339
(R,R)-Tartaric acid <=> Oxaloacetate + H2O
(R,R)-tartrate hydro-lyase (oxaloacetate-forming)
Swm_01849 K01678 E4.2.1.2AB, fumB R01082
(S)-Malate <=> Fumarate + H2O
(S)-malate hydro-lyase (fumarate-forming)

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Swm_01849
Biosynthesis of secondary metabolites 1 genes
Swm_01849
Microbial metabolism in diverse environments 1 genes
Swm_01849
Map 01130 1 genes
Swm_01849
Carbon metabolism 1 genes
Swm_01849

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Swm_01849 L( )-tartrate dehydratase subunit beta K01678 E4.2.1.2AB, fumB; K03780 ttdB 4.2.1.2,4.2.1.32 R00339,R01082
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