Small Microbes Pathway Profiler

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Gene activity

Syntrophomonas wolfei methylbutyratica 4J5 · 1 genes
1
genes
1
KO-annotated
4
reactions
2
pathways

Activity by pathway — click to expand; ranked by genes involved

Nucleocytoplasmic transportGenetic Information Processing; Translation1 genes · 4 rxns
Swm_02076 K00970 pcnB R09382
tRNA precursor + 2 CTP + ATP <=> tRNA with a 3' CCA end + 3 Diphosphate
CTP,CTP,ATP:tRNA cytidylyl,cytidylyl,adenylyltransferase
Swm_02076 K00970 pcnB R09383
tRNA precursor + CTP <=> tRNA with a 3' cytidine + Diphosphate
CTP:tRNA cytidylyltransferase
Swm_02076 K00970 pcnB R09384
tRNA with a 3' cytidine + CTP <=> tRNA with a 3' CC end + Diphosphate
CTP:tRNA cytidylyltransferase
Swm_02076 K00970 pcnB R09386
tRNA with a 3' CC end + ATP <=> tRNA with a 3' CCA end + Diphosphate
ATP:tRNA adenylyltransferase
RNA degradationGenetic Information Processing; Folding, sorting and degradation1 genes · 4 rxns
Swm_02076 K00970 pcnB R09382
tRNA precursor + 2 CTP + ATP <=> tRNA with a 3' CCA end + 3 Diphosphate
CTP,CTP,ATP:tRNA cytidylyl,cytidylyl,adenylyltransferase
Swm_02076 K00970 pcnB R09383
tRNA precursor + CTP <=> tRNA with a 3' cytidine + Diphosphate
CTP:tRNA cytidylyltransferase
Swm_02076 K00970 pcnB R09384
tRNA with a 3' cytidine + CTP <=> tRNA with a 3' CC end + Diphosphate
CTP:tRNA cytidylyltransferase
Swm_02076 K00970 pcnB R09386
tRNA with a 3' CC end + ATP <=> tRNA with a 3' CCA end + Diphosphate
ATP:tRNA adenylyltransferase

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Swm_02076 CCA tRNA nucleotidyltransferase K00970 pcnB; K00974 cca 2.7.7.19,2.7.7.72 R09382,R09383,R09384,R09386
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