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◀ domain architecture  ·  operons  ·  ❔ guide

Gene activity

Syntrophomonas erecta DSM 16215 · 1 genes
1
genes
1
KO-annotated
12
reactions
6
pathways

Activity by pathway — click to expand; ranked by genes involved

Fatty acid degradationMetabolism; Lipid metabolism1 genes · 12 rxns
Ser_00576 K00248 ACADS, bcd R01175
Butanoyl-CoA + FAD <=> FADH2 + Crotonoyl-CoA
butanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R01178
Short-chain acyl-CoA + Electron-transferring flavoprotein <=> Short-chain trans-2,3-dehydroacyl-CoA + Reduced electron-transferring flavoprotein
short-chain acyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R01279
Palmitoyl-CoA + FAD <=> trans-Hexadec-2-enoyl-CoA + FADH2
palmitoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R02661
2-Methylpropanoyl-CoA + Acceptor <=> 2-Methylprop-2-enoyl-CoA + Reduced acceptor
2-methylpropanoyl-CoA:(acceptor) 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03172
(S)-2-Methylbutanoyl-CoA + Acceptor <=> 2-Methylbut-2-enoyl-CoA + Reduced acceptor
(S)-2-methylbutanoyl-CoA:acceptor 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03777
Octanoyl-CoA + FAD <=> trans-Oct-2-enoyl-CoA + FADH2
octanoyl-CoA:electron-transfer flavoprotein 2-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03857
Lauroyl-CoA + FAD <=> 2-trans-Dodecenoyl-CoA + FADH2
lauroyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03990
Tetradecanoyl-CoA + FAD <=> trans-Tetradec-2-enoyl-CoA + FADH2
tetradecanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04095
3-Methylbutanoyl-CoA + FAD <=> 3-Methylcrotonyl-CoA + FADH2
3-methylbutanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04432
Electron-transferring flavoprotein + Propanoyl-CoA <=> Reduced electron-transferring flavoprotein + Propenoyl-CoA
propanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04751
Hexanoyl-CoA + FAD <=> trans-Hex-2-enoyl-CoA + FADH2
hexanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04754
Decanoyl-CoA + FAD <=> trans-Dec-2-enoyl-CoA + FADH2
decanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Valine, leucine and isoleucine degradationMetabolism; Amino acid metabolism1 genes · 12 rxns
Ser_00576 K00248 ACADS, bcd R01175
Butanoyl-CoA + FAD <=> FADH2 + Crotonoyl-CoA
butanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R01178
Short-chain acyl-CoA + Electron-transferring flavoprotein <=> Short-chain trans-2,3-dehydroacyl-CoA + Reduced electron-transferring flavoprotein
short-chain acyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R01279
Palmitoyl-CoA + FAD <=> trans-Hexadec-2-enoyl-CoA + FADH2
palmitoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R02661
2-Methylpropanoyl-CoA + Acceptor <=> 2-Methylprop-2-enoyl-CoA + Reduced acceptor
2-methylpropanoyl-CoA:(acceptor) 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03172
(S)-2-Methylbutanoyl-CoA + Acceptor <=> 2-Methylbut-2-enoyl-CoA + Reduced acceptor
(S)-2-methylbutanoyl-CoA:acceptor 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03777
Octanoyl-CoA + FAD <=> trans-Oct-2-enoyl-CoA + FADH2
octanoyl-CoA:electron-transfer flavoprotein 2-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03857
Lauroyl-CoA + FAD <=> 2-trans-Dodecenoyl-CoA + FADH2
lauroyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03990
Tetradecanoyl-CoA + FAD <=> trans-Tetradec-2-enoyl-CoA + FADH2
tetradecanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04095
3-Methylbutanoyl-CoA + FAD <=> 3-Methylcrotonyl-CoA + FADH2
3-methylbutanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04432
Electron-transferring flavoprotein + Propanoyl-CoA <=> Reduced electron-transferring flavoprotein + Propenoyl-CoA
propanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04751
Hexanoyl-CoA + FAD <=> trans-Hex-2-enoyl-CoA + FADH2
hexanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04754
Decanoyl-CoA + FAD <=> trans-Dec-2-enoyl-CoA + FADH2
decanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
beta-Alanine metabolismMetabolism; Metabolism of other amino acids1 genes · 12 rxns
Ser_00576 K00248 ACADS, bcd R01175
Butanoyl-CoA + FAD <=> FADH2 + Crotonoyl-CoA
butanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R01178
Short-chain acyl-CoA + Electron-transferring flavoprotein <=> Short-chain trans-2,3-dehydroacyl-CoA + Reduced electron-transferring flavoprotein
short-chain acyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R01279
Palmitoyl-CoA + FAD <=> trans-Hexadec-2-enoyl-CoA + FADH2
palmitoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R02661
2-Methylpropanoyl-CoA + Acceptor <=> 2-Methylprop-2-enoyl-CoA + Reduced acceptor
2-methylpropanoyl-CoA:(acceptor) 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03172
(S)-2-Methylbutanoyl-CoA + Acceptor <=> 2-Methylbut-2-enoyl-CoA + Reduced acceptor
(S)-2-methylbutanoyl-CoA:acceptor 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03777
Octanoyl-CoA + FAD <=> trans-Oct-2-enoyl-CoA + FADH2
octanoyl-CoA:electron-transfer flavoprotein 2-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03857
Lauroyl-CoA + FAD <=> 2-trans-Dodecenoyl-CoA + FADH2
lauroyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03990
Tetradecanoyl-CoA + FAD <=> trans-Tetradec-2-enoyl-CoA + FADH2
tetradecanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04095
3-Methylbutanoyl-CoA + FAD <=> 3-Methylcrotonyl-CoA + FADH2
3-methylbutanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04432
Electron-transferring flavoprotein + Propanoyl-CoA <=> Reduced electron-transferring flavoprotein + Propenoyl-CoA
propanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04751
Hexanoyl-CoA + FAD <=> trans-Hex-2-enoyl-CoA + FADH2
hexanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04754
Decanoyl-CoA + FAD <=> trans-Dec-2-enoyl-CoA + FADH2
decanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Propanoate metabolismMetabolism; Carbohydrate metabolism1 genes · 12 rxns
Ser_00576 K00248 ACADS, bcd R01175
Butanoyl-CoA + FAD <=> FADH2 + Crotonoyl-CoA
butanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R01178
Short-chain acyl-CoA + Electron-transferring flavoprotein <=> Short-chain trans-2,3-dehydroacyl-CoA + Reduced electron-transferring flavoprotein
short-chain acyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R01279
Palmitoyl-CoA + FAD <=> trans-Hexadec-2-enoyl-CoA + FADH2
palmitoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R02661
2-Methylpropanoyl-CoA + Acceptor <=> 2-Methylprop-2-enoyl-CoA + Reduced acceptor
2-methylpropanoyl-CoA:(acceptor) 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03172
(S)-2-Methylbutanoyl-CoA + Acceptor <=> 2-Methylbut-2-enoyl-CoA + Reduced acceptor
(S)-2-methylbutanoyl-CoA:acceptor 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03777
Octanoyl-CoA + FAD <=> trans-Oct-2-enoyl-CoA + FADH2
octanoyl-CoA:electron-transfer flavoprotein 2-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03857
Lauroyl-CoA + FAD <=> 2-trans-Dodecenoyl-CoA + FADH2
lauroyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03990
Tetradecanoyl-CoA + FAD <=> trans-Tetradec-2-enoyl-CoA + FADH2
tetradecanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04095
3-Methylbutanoyl-CoA + FAD <=> 3-Methylcrotonyl-CoA + FADH2
3-methylbutanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04432
Electron-transferring flavoprotein + Propanoyl-CoA <=> Reduced electron-transferring flavoprotein + Propenoyl-CoA
propanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04751
Hexanoyl-CoA + FAD <=> trans-Hex-2-enoyl-CoA + FADH2
hexanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04754
Decanoyl-CoA + FAD <=> trans-Dec-2-enoyl-CoA + FADH2
decanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Butanoate metabolismMetabolism; Carbohydrate metabolism1 genes · 12 rxns
Ser_00576 K00248 ACADS, bcd R01175
Butanoyl-CoA + FAD <=> FADH2 + Crotonoyl-CoA
butanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R01178
Short-chain acyl-CoA + Electron-transferring flavoprotein <=> Short-chain trans-2,3-dehydroacyl-CoA + Reduced electron-transferring flavoprotein
short-chain acyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R01279
Palmitoyl-CoA + FAD <=> trans-Hexadec-2-enoyl-CoA + FADH2
palmitoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R02661
2-Methylpropanoyl-CoA + Acceptor <=> 2-Methylprop-2-enoyl-CoA + Reduced acceptor
2-methylpropanoyl-CoA:(acceptor) 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03172
(S)-2-Methylbutanoyl-CoA + Acceptor <=> 2-Methylbut-2-enoyl-CoA + Reduced acceptor
(S)-2-methylbutanoyl-CoA:acceptor 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03777
Octanoyl-CoA + FAD <=> trans-Oct-2-enoyl-CoA + FADH2
octanoyl-CoA:electron-transfer flavoprotein 2-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03857
Lauroyl-CoA + FAD <=> 2-trans-Dodecenoyl-CoA + FADH2
lauroyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03990
Tetradecanoyl-CoA + FAD <=> trans-Tetradec-2-enoyl-CoA + FADH2
tetradecanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04095
3-Methylbutanoyl-CoA + FAD <=> 3-Methylcrotonyl-CoA + FADH2
3-methylbutanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04432
Electron-transferring flavoprotein + Propanoyl-CoA <=> Reduced electron-transferring flavoprotein + Propenoyl-CoA
propanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04751
Hexanoyl-CoA + FAD <=> trans-Hex-2-enoyl-CoA + FADH2
hexanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04754
Decanoyl-CoA + FAD <=> trans-Dec-2-enoyl-CoA + FADH2
decanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
PPAR signaling pathwayOrganismal Systems; Endocrine system1 genes · 12 rxns
Ser_00576 K00248 ACADS, bcd R01175
Butanoyl-CoA + FAD <=> FADH2 + Crotonoyl-CoA
butanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R01178
Short-chain acyl-CoA + Electron-transferring flavoprotein <=> Short-chain trans-2,3-dehydroacyl-CoA + Reduced electron-transferring flavoprotein
short-chain acyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R01279
Palmitoyl-CoA + FAD <=> trans-Hexadec-2-enoyl-CoA + FADH2
palmitoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R02661
2-Methylpropanoyl-CoA + Acceptor <=> 2-Methylprop-2-enoyl-CoA + Reduced acceptor
2-methylpropanoyl-CoA:(acceptor) 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03172
(S)-2-Methylbutanoyl-CoA + Acceptor <=> 2-Methylbut-2-enoyl-CoA + Reduced acceptor
(S)-2-methylbutanoyl-CoA:acceptor 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03777
Octanoyl-CoA + FAD <=> trans-Oct-2-enoyl-CoA + FADH2
octanoyl-CoA:electron-transfer flavoprotein 2-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03857
Lauroyl-CoA + FAD <=> 2-trans-Dodecenoyl-CoA + FADH2
lauroyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R03990
Tetradecanoyl-CoA + FAD <=> trans-Tetradec-2-enoyl-CoA + FADH2
tetradecanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04095
3-Methylbutanoyl-CoA + FAD <=> 3-Methylcrotonyl-CoA + FADH2
3-methylbutanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04432
Electron-transferring flavoprotein + Propanoyl-CoA <=> Reduced electron-transferring flavoprotein + Propenoyl-CoA
propanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04751
Hexanoyl-CoA + FAD <=> trans-Hex-2-enoyl-CoA + FADH2
hexanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Ser_00576 K00248 ACADS, bcd R04754
Decanoyl-CoA + FAD <=> trans-Dec-2-enoyl-CoA + FADH2
decanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Ser_00576
Biosynthesis of secondary metabolites 1 genes
Ser_00576
Microbial metabolism in diverse environments 1 genes
Ser_00576
Map 01130 1 genes
Ser_00576
Carbon metabolism 1 genes
Ser_00576
Fatty acid metabolism 1 genes
Ser_00576

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Ser_00576 acyl-CoA dehydrogenase K00248 ACADS, bcd; K00249 ACADM, acd 1.3.8.1,1.3.8.7 R00924,R01175,R01178,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754
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