Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide

Gene activity

Syntrophomonas erecta DSM 16215 · 1 genes
1
genes
1
KO-annotated
3
reactions
3
pathways

Activity by pathway — click to expand; ranked by genes involved

Glycine, serine and threonine metabolismMetabolism; Amino acid metabolism1 genes · 3 rxns
Ser_00716 K00018 hprA R00717
Glycolate + NAD+ <=> Glyoxylate + NADH + H+
glycolate:NAD+ oxidoreductase
Ser_00716 K00018 hprA R01388
D-Glycerate + NAD+ <=> Hydroxypyruvate + NADH + H+
D-glycerate:NAD+ 2-oxidoreductase
Ser_00716 K00018 hprA R01513
3-Phospho-D-glycerate + NAD+ <=> 3-Phosphonooxypyruvate + NADH + H+
3-phospho-D-glycerate:NAD+ 2-oxidoreductase
Glyoxylate and dicarboxylate metabolismMetabolism; Carbohydrate metabolism1 genes · 3 rxns
Ser_00716 K00018 hprA R00717
Glycolate + NAD+ <=> Glyoxylate + NADH + H+
glycolate:NAD+ oxidoreductase
Ser_00716 K00018 hprA R01388
D-Glycerate + NAD+ <=> Hydroxypyruvate + NADH + H+
D-glycerate:NAD+ 2-oxidoreductase
Ser_00716 K00018 hprA R01513
3-Phospho-D-glycerate + NAD+ <=> 3-Phosphonooxypyruvate + NADH + H+
3-phospho-D-glycerate:NAD+ 2-oxidoreductase
Methane metabolismMetabolism; Energy metabolism1 genes · 3 rxns
Ser_00716 K00018 hprA R00717
Glycolate + NAD+ <=> Glyoxylate + NADH + H+
glycolate:NAD+ oxidoreductase
Ser_00716 K00018 hprA R01388
D-Glycerate + NAD+ <=> Hydroxypyruvate + NADH + H+
D-glycerate:NAD+ 2-oxidoreductase
Ser_00716 K00018 hprA R01513
3-Phospho-D-glycerate + NAD+ <=> 3-Phosphonooxypyruvate + NADH + H+
3-phospho-D-glycerate:NAD+ 2-oxidoreductase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Ser_00716
Biosynthesis of secondary metabolites 1 genes
Ser_00716
Microbial metabolism in diverse environments 1 genes
Ser_00716
Map 01130 1 genes
Ser_00716
Carbon metabolism 1 genes
Ser_00716
Biosynthesis of amino acids 1 genes
Ser_00716

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Ser_00716 D-2-hydroxyacid dehydrogenase K00018 hprA; K00058 serA, PHGDH 1.1.1.29,1.1.1.399,1.1.1.95 R00717,R01388,R01513
↑ Top




v1.00 @copyright 2026 UCLA