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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_CM161535.1:658,942–662,703

Syntrophomonas wolfei saponavida · 5 genes
5
genes
4
KO-annotated
12
reactions
5
pathways

Activity by pathway — click to expand; ranked by genes involved

Fatty acid biosynthesisMetabolism; Lipid metabolism3 genes · 14 rxns
Sws_00615 K01962 accA R00742
ATP + Acetyl-CoA + HCO3- <=> ADP + Orthophosphate + Malonyl-CoA
acetyl-CoA:carbon-dioxide ligase (ADP-forming)
Sws_00615 K01962 accA R04386
Acetyl-CoA + Carboxybiotin-carboxyl-carrier protein <=> Malonyl-CoA + Holo-[carboxylase]
carboxybiotin-carboxyl-carrier-protein:acetyl-CoA carboxytransferase
Sws_00616 K01962 accA R00742
ATP + Acetyl-CoA + HCO3- <=> ADP + Orthophosphate + Malonyl-CoA
acetyl-CoA:carbon-dioxide ligase (ADP-forming)
Sws_00616 K01962 accA R04386
Acetyl-CoA + Carboxybiotin-carboxyl-carrier protein <=> Malonyl-CoA + Holo-[carboxylase]
carboxybiotin-carboxyl-carrier-protein:acetyl-CoA carboxytransferase
Sws_00618 K09458 fabF, OXSM, CEM1 R04355
Acetyl-[acyl-carrier protein] + Malonyl-[acyl-carrier protein] <=> Acetoacetyl-[acp] + CO2 + Acyl-carrier protein
acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
Sws_00618 K09458 fabF, OXSM, CEM1 R04726
Dodecanoyl-[acyl-carrier protein] + Malonyl-[acyl-carrier protein] <=> 3-Oxotetradecanoyl-[acp] + CO2 + Acyl-carrier protein
dodecanoyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
Sws_00618 K09458 fabF, OXSM, CEM1 R04952
Butyryl-[acp] + Malonyl-[acyl-carrier protein] <=> 3-Oxohexanoyl-[acp] + CO2 + Acyl-carrier protein
butyryl-[acyl-carrier protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
Sws_00618 K09458 fabF, OXSM, CEM1 R04957
Hexanoyl-[acp] + Malonyl-[acyl-carrier protein] <=> 3-Oxooctanoyl-[acp] + CO2 + Acyl-carrier protein
hexanoyl-[acyl-carrier protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
Sws_00618 K09458 fabF, OXSM, CEM1 R04960
Octanoyl-[acp] + Malonyl-[acyl-carrier protein] <=> 3-Oxodecanoyl-[acp] + CO2 + Acyl-carrier protein
octanoyl-[acyl-carrier protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
Sws_00618 K09458 fabF, OXSM, CEM1 R04963
Decanoyl-[acp] + Malonyl-[acyl-carrier protein] <=> 3-Oxododecanoyl-[acp] + CO2 + Acyl-carrier protein
decanoyl-[acyl-carrier protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
Sws_00618 K09458 fabF, OXSM, CEM1 R04968
Tetradecanoyl-[acp] + Malonyl-[acyl-carrier protein] <=> 3-Oxohexadecanoyl-[acp] + CO2 + Acyl-carrier protein
tetradecanoyl-[acyl-carrier protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
Sws_00618 K09458 fabF, OXSM, CEM1 R07762
Hexadecanoyl-[acp] + Malonyl-[acyl-carrier protein] <=> 3-Oxostearoyl-[acp] + Acyl-carrier protein + CO2
Sws_00618 K09458 fabF, OXSM, CEM1 R10115
Malonyl-[acp] methyl ester + Malonyl-[acyl-carrier protein] <=> 3-Ketoglutaryl-[acp] methyl ester + CO2 + Acyl-carrier protein
malonyl-[acyl-carrier protein]-methyl-ester:malonyl-[acyl-carrier protein] C-acyltransferase
Sws_00618 K09458 fabF, OXSM, CEM1 R10119
Glutaryl-[acp] methyl ester + Malonyl-[acyl-carrier protein] <=> 3-Ketopimeloyl-[acp] methyl ester + CO2 + Acyl-carrier protein
glutaryl-[acp]-methyl-ester:malonyl-[acyl-carrier protein] C-acyltransferase (decarboxylating)
Pyruvate metabolismMetabolism; Carbohydrate metabolism2 genes · 4 rxns
Sws_00615 K01962 accA R00742
ATP + Acetyl-CoA + HCO3- <=> ADP + Orthophosphate + Malonyl-CoA
acetyl-CoA:carbon-dioxide ligase (ADP-forming)
Sws_00615 K01962 accA R04386
Acetyl-CoA + Carboxybiotin-carboxyl-carrier protein <=> Malonyl-CoA + Holo-[carboxylase]
carboxybiotin-carboxyl-carrier-protein:acetyl-CoA carboxytransferase
Sws_00616 K01962 accA R00742
ATP + Acetyl-CoA + HCO3- <=> ADP + Orthophosphate + Malonyl-CoA
acetyl-CoA:carbon-dioxide ligase (ADP-forming)
Sws_00616 K01962 accA R04386
Acetyl-CoA + Carboxybiotin-carboxyl-carrier protein <=> Malonyl-CoA + Holo-[carboxylase]
carboxybiotin-carboxyl-carrier-protein:acetyl-CoA carboxytransferase
Propanoate metabolismMetabolism; Carbohydrate metabolism2 genes · 4 rxns
Sws_00615 K01962 accA R00742
ATP + Acetyl-CoA + HCO3- <=> ADP + Orthophosphate + Malonyl-CoA
acetyl-CoA:carbon-dioxide ligase (ADP-forming)
Sws_00615 K01962 accA R04386
Acetyl-CoA + Carboxybiotin-carboxyl-carrier protein <=> Malonyl-CoA + Holo-[carboxylase]
carboxybiotin-carboxyl-carrier-protein:acetyl-CoA carboxytransferase
Sws_00616 K01962 accA R00742
ATP + Acetyl-CoA + HCO3- <=> ADP + Orthophosphate + Malonyl-CoA
acetyl-CoA:carbon-dioxide ligase (ADP-forming)
Sws_00616 K01962 accA R04386
Acetyl-CoA + Carboxybiotin-carboxyl-carrier protein <=> Malonyl-CoA + Holo-[carboxylase]
carboxybiotin-carboxyl-carrier-protein:acetyl-CoA carboxytransferase
Other carbon fixation pathwaysMetabolism; Energy metabolism2 genes · 4 rxns
Sws_00615 K01962 accA R00742
ATP + Acetyl-CoA + HCO3- <=> ADP + Orthophosphate + Malonyl-CoA
acetyl-CoA:carbon-dioxide ligase (ADP-forming)
Sws_00615 K01962 accA R04386
Acetyl-CoA + Carboxybiotin-carboxyl-carrier protein <=> Malonyl-CoA + Holo-[carboxylase]
carboxybiotin-carboxyl-carrier-protein:acetyl-CoA carboxytransferase
Sws_00616 K01962 accA R00742
ATP + Acetyl-CoA + HCO3- <=> ADP + Orthophosphate + Malonyl-CoA
acetyl-CoA:carbon-dioxide ligase (ADP-forming)
Sws_00616 K01962 accA R04386
Acetyl-CoA + Carboxybiotin-carboxyl-carrier protein <=> Malonyl-CoA + Holo-[carboxylase]
carboxybiotin-carboxyl-carrier-protein:acetyl-CoA carboxytransferase
Biotin metabolismMetabolism; Metabolism of cofactors and vitamins1 genes · 10 rxns
Sws_00618 K09458 fabF, OXSM, CEM1 R04355
Acetyl-[acyl-carrier protein] + Malonyl-[acyl-carrier protein] <=> Acetoacetyl-[acp] + CO2 + Acyl-carrier protein
acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
Sws_00618 K09458 fabF, OXSM, CEM1 R04726
Dodecanoyl-[acyl-carrier protein] + Malonyl-[acyl-carrier protein] <=> 3-Oxotetradecanoyl-[acp] + CO2 + Acyl-carrier protein
dodecanoyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
Sws_00618 K09458 fabF, OXSM, CEM1 R04952
Butyryl-[acp] + Malonyl-[acyl-carrier protein] <=> 3-Oxohexanoyl-[acp] + CO2 + Acyl-carrier protein
butyryl-[acyl-carrier protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
Sws_00618 K09458 fabF, OXSM, CEM1 R04957
Hexanoyl-[acp] + Malonyl-[acyl-carrier protein] <=> 3-Oxooctanoyl-[acp] + CO2 + Acyl-carrier protein
hexanoyl-[acyl-carrier protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
Sws_00618 K09458 fabF, OXSM, CEM1 R04960
Octanoyl-[acp] + Malonyl-[acyl-carrier protein] <=> 3-Oxodecanoyl-[acp] + CO2 + Acyl-carrier protein
octanoyl-[acyl-carrier protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
Sws_00618 K09458 fabF, OXSM, CEM1 R04963
Decanoyl-[acp] + Malonyl-[acyl-carrier protein] <=> 3-Oxododecanoyl-[acp] + CO2 + Acyl-carrier protein
decanoyl-[acyl-carrier protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
Sws_00618 K09458 fabF, OXSM, CEM1 R04968
Tetradecanoyl-[acp] + Malonyl-[acyl-carrier protein] <=> 3-Oxohexadecanoyl-[acp] + CO2 + Acyl-carrier protein
tetradecanoyl-[acyl-carrier protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
Sws_00618 K09458 fabF, OXSM, CEM1 R07762
Hexadecanoyl-[acp] + Malonyl-[acyl-carrier protein] <=> 3-Oxostearoyl-[acp] + Acyl-carrier protein + CO2
Sws_00618 K09458 fabF, OXSM, CEM1 R10115
Malonyl-[acp] methyl ester + Malonyl-[acyl-carrier protein] <=> 3-Ketoglutaryl-[acp] methyl ester + CO2 + Acyl-carrier protein
malonyl-[acyl-carrier protein]-methyl-ester:malonyl-[acyl-carrier protein] C-acyltransferase
Sws_00618 K09458 fabF, OXSM, CEM1 R10119
Glutaryl-[acp] methyl ester + Malonyl-[acyl-carrier protein] <=> 3-Ketopimeloyl-[acp] methyl ester + CO2 + Acyl-carrier protein
glutaryl-[acp]-methyl-ester:malonyl-[acyl-carrier protein] C-acyltransferase (decarboxylating)

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 3 genes
Sws_00615 Sws_00616 Sws_00618
Fatty acid metabolism 3 genes
Sws_00615 Sws_00616 Sws_00618
Biosynthesis of secondary metabolites 2 genes
Sws_00615 Sws_00616
Microbial metabolism in diverse environments 2 genes
Sws_00615 Sws_00616
Map 01130 2 genes
Sws_00615 Sws_00616
Carbon metabolism 2 genes
Sws_00615 Sws_00616

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Sws_00615 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA 2.1.3.15,6.4.1.2 R00742,R04386
Sws_00616 acetyl-CoA carboxylase, carboxyltransferase subunit beta K01962 accA; K01963 accD 2.1.3.15,6.4.1.2 R00742,R04386
Sws_00617 3-hydroxyacyl-ACP dehydratase FabZ — — —
Sws_00618 beta-ketoacyl-ACP synthase II K09458 fabF, OXSM, CEM1 2.3.1.179 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119
Sws_00619 acyl carrier protein K02078 acpP, acpM — —
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