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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_CM161535.1:1,110,680–1,115,105

Syntrophomonas wolfei saponavida · 4 genes
4
genes
4
KO-annotated
11
reactions
6
pathways

Activity by pathway — click to expand; ranked by genes involved

Butanoate metabolismMetabolism; Carbohydrate metabolism4 genes · 11 rxns
Sws_01051 K00483 hpaB R02698
4-Hydroxyphenylacetate + Oxygen + NADH + H+ <=> 3,4-Dihydroxyphenylacetate + NAD+ + H2O
4-hydroxyphenylacetate,NADH:oxygen oxidoreductase (3-hydroxylating)
Sws_01051 K00483 hpaB R03031
Vinylacetyl-CoA <=> Crotonoyl-CoA
vinylacetyl-CoA Delta3-Delta2-isomerase
Sws_01051 K00483 hpaB R03299
3-Hydroxyphenylacetate + Oxygen + NADH + H+ <=> 3,4-Dihydroxyphenylacetate + NAD+ + H2O
3-hydroxyphenylacetate,NADH:oxygen oxidoreductase (3-hydroxylating)
Sws_01051 K00483 hpaB R10782
4-Hydroxybutyryl-CoA <=> Crotonoyl-CoA + H2O
4-hydroxybutanoyl-CoA hydro-lyase
Sws_01052 K17865 croR R03027
(R)-3-Hydroxybutanoyl-CoA <=> Crotonoyl-CoA + H2O
(3R)-3-hydroxybutanoyl-CoA hydro-lyase
Sws_01053 K00248 ACADS, bcd R01175
Butanoyl-CoA + FAD <=> FADH2 + Crotonoyl-CoA
butanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Sws_01053 K00248 ACADS, bcd R01178
Short-chain acyl-CoA + Electron-transferring flavoprotein <=> Short-chain trans-2,3-dehydroacyl-CoA + Reduced electron-transferring flavoprotein
short-chain acyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Sws_01053 K00248 ACADS, bcd R02661
2-Methylpropanoyl-CoA + Acceptor <=> 2-Methylprop-2-enoyl-CoA + Reduced acceptor
2-methylpropanoyl-CoA:(acceptor) 2,3-oxidoreductase
Sws_01053 K00248 ACADS, bcd R03172
(S)-2-Methylbutanoyl-CoA + Acceptor <=> 2-Methylbut-2-enoyl-CoA + Reduced acceptor
(S)-2-methylbutanoyl-CoA:acceptor 2,3-oxidoreductase
Sws_01053 K00248 ACADS, bcd R04751
Hexanoyl-CoA + FAD <=> trans-Hex-2-enoyl-CoA + FADH2
hexanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Sws_01054 K18122 cat2, abfT R05336
4-Hydroxybutanoic acid + Acetyl-CoA <=> 4-Hydroxybutyryl-CoA + Acetate
acetyl-CoA:4-hydroxybutanoate CoA-transferase
Tyrosine metabolismMetabolism; Amino acid metabolism1 genes · 4 rxns
Sws_01051 K00483 hpaB R02698
4-Hydroxyphenylacetate + Oxygen + NADH + H+ <=> 3,4-Dihydroxyphenylacetate + NAD+ + H2O
4-hydroxyphenylacetate,NADH:oxygen oxidoreductase (3-hydroxylating)
Sws_01051 K00483 hpaB R03031
Vinylacetyl-CoA <=> Crotonoyl-CoA
vinylacetyl-CoA Delta3-Delta2-isomerase
Sws_01051 K00483 hpaB R03299
3-Hydroxyphenylacetate + Oxygen + NADH + H+ <=> 3,4-Dihydroxyphenylacetate + NAD+ + H2O
3-hydroxyphenylacetate,NADH:oxygen oxidoreductase (3-hydroxylating)
Sws_01051 K00483 hpaB R10782
4-Hydroxybutyryl-CoA <=> Crotonoyl-CoA + H2O
4-hydroxybutanoyl-CoA hydro-lyase
Other carbon fixation pathwaysMetabolism; Energy metabolism1 genes · 4 rxns
Sws_01051 K00483 hpaB R02698
4-Hydroxyphenylacetate + Oxygen + NADH + H+ <=> 3,4-Dihydroxyphenylacetate + NAD+ + H2O
4-hydroxyphenylacetate,NADH:oxygen oxidoreductase (3-hydroxylating)
Sws_01051 K00483 hpaB R03031
Vinylacetyl-CoA <=> Crotonoyl-CoA
vinylacetyl-CoA Delta3-Delta2-isomerase
Sws_01051 K00483 hpaB R03299
3-Hydroxyphenylacetate + Oxygen + NADH + H+ <=> 3,4-Dihydroxyphenylacetate + NAD+ + H2O
3-hydroxyphenylacetate,NADH:oxygen oxidoreductase (3-hydroxylating)
Sws_01051 K00483 hpaB R10782
4-Hydroxybutyryl-CoA <=> Crotonoyl-CoA + H2O
4-hydroxybutanoyl-CoA hydro-lyase
Glyoxylate and dicarboxylate metabolismMetabolism; Carbohydrate metabolism1 genes · 1 rxns
Sws_01052 K17865 croR R03027
(R)-3-Hydroxybutanoyl-CoA <=> Crotonoyl-CoA + H2O
(3R)-3-hydroxybutanoyl-CoA hydro-lyase
Fatty acid degradationMetabolism; Lipid metabolism1 genes · 5 rxns
Sws_01053 K00248 ACADS, bcd R01175
Butanoyl-CoA + FAD <=> FADH2 + Crotonoyl-CoA
butanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Sws_01053 K00248 ACADS, bcd R01178
Short-chain acyl-CoA + Electron-transferring flavoprotein <=> Short-chain trans-2,3-dehydroacyl-CoA + Reduced electron-transferring flavoprotein
short-chain acyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Sws_01053 K00248 ACADS, bcd R02661
2-Methylpropanoyl-CoA + Acceptor <=> 2-Methylprop-2-enoyl-CoA + Reduced acceptor
2-methylpropanoyl-CoA:(acceptor) 2,3-oxidoreductase
Sws_01053 K00248 ACADS, bcd R03172
(S)-2-Methylbutanoyl-CoA + Acceptor <=> 2-Methylbut-2-enoyl-CoA + Reduced acceptor
(S)-2-methylbutanoyl-CoA:acceptor 2,3-oxidoreductase
Sws_01053 K00248 ACADS, bcd R04751
Hexanoyl-CoA + FAD <=> trans-Hex-2-enoyl-CoA + FADH2
hexanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Valine, leucine and isoleucine degradationMetabolism; Amino acid metabolism1 genes · 5 rxns
Sws_01053 K00248 ACADS, bcd R01175
Butanoyl-CoA + FAD <=> FADH2 + Crotonoyl-CoA
butanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Sws_01053 K00248 ACADS, bcd R01178
Short-chain acyl-CoA + Electron-transferring flavoprotein <=> Short-chain trans-2,3-dehydroacyl-CoA + Reduced electron-transferring flavoprotein
short-chain acyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase
Sws_01053 K00248 ACADS, bcd R02661
2-Methylpropanoyl-CoA + Acceptor <=> 2-Methylprop-2-enoyl-CoA + Reduced acceptor
2-methylpropanoyl-CoA:(acceptor) 2,3-oxidoreductase
Sws_01053 K00248 ACADS, bcd R03172
(S)-2-Methylbutanoyl-CoA + Acceptor <=> 2-Methylbut-2-enoyl-CoA + Reduced acceptor
(S)-2-methylbutanoyl-CoA:acceptor 2,3-oxidoreductase
Sws_01053 K00248 ACADS, bcd R04751
Hexanoyl-CoA + FAD <=> trans-Hex-2-enoyl-CoA + FADH2
hexanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase

Overview / global maps (every metabolic gene maps here)

Carbon metabolism 4 genes
Sws_01051 Sws_01052 Sws_01053 Sws_01054
Metabolic pathways 3 genes
Sws_01051 Sws_01053 Sws_01054
Microbial metabolism in diverse environments 3 genes
Sws_01051 Sws_01052 Sws_01053
Degradation of aromatic compounds 1 genes
Sws_01051
Biosynthesis of secondary metabolites 1 genes
Sws_01053
Fatty acid metabolism 1 genes
Sws_01053

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Sws_01051 4-hydroxyphenylacetate 3-hydroxylase family protein K00483 hpaB; K14534 abfD 1.14.14.9,4.2.1.120,5.3.3.3 R02698,R03031,R03299,R10782
Sws_01052 MaoC family dehydratase K17865 croR 4.2.1.55 R03027
Sws_01053 acyl-CoA dehydrogenase K00248 ACADS, bcd 1.3.8.1 R01175,R01178,R02661,R03172,R04751
Sws_01054 acetyl-CoA hydrolase/transferase family protein K18122 cat2, abfT — R05336
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