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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_BBCE01000019.1:5,583–14,236

Syntrophomonas palmitatica JCM14374 Spalm · 6 genes
6
genes
5
KO-annotated
6
reactions
6
pathways

Activity by pathway — click to expand; ranked by genes involved

Aminoacyl-tRNA biosynthesisGenetic Information Processing; Translation2 genes · 2 rxns
Spalm_02055 K01890 FARSB, pheT R03660
ATP + L-Phenylalanine + tRNA(Phe) <=> AMP + Diphosphate + L-Phenylalanyl-tRNA(Phe)
L-phenylalanine:tRNA(Ala) ligase (AMP-forming)
Spalm_02056 K01889 FARSA, pheS R03660
ATP + L-Phenylalanine + tRNA(Phe) <=> AMP + Diphosphate + L-Phenylalanyl-tRNA(Phe)
L-phenylalanine:tRNA(Ala) ligase (AMP-forming)
Two-component systemEnvironmental Information Processing; Signal transduction2 genes · 0 rxns
Spalm_02051 K02040 pstS
Spalm_02052 K07636 phoR
ABC transportersEnvironmental Information Processing; Membrane transport1 genes · 0 rxns
Spalm_02051 K02040 pstS
TuberculosisHuman Diseases; Infectious disease: bacterial1 genes · 0 rxns
Spalm_02051 K02040 pstS
Pyrimidine metabolismMetabolism; Nucleotide metabolism1 genes · 5 rxns
Spalm_02054 K00876 udk, UCK R00513
ATP + Cytidine <=> ADP + CMP
ATP:cytidine 5'-phosphotransferase
Spalm_02054 K00876 udk, UCK R00517
GTP + Cytidine <=> GDP + CMP
GTP:cytidine 5'-phosphotransferase
Spalm_02054 K00876 udk, UCK R00964
ATP + Uridine <=> ADP + UMP
ATP:uridine 5'-phosphotransferase
Spalm_02054 K00876 udk, UCK R00968
GTP + Uridine <=> GDP + UMP
GTP:uridine 5'-phosphotransferase
Spalm_02054 K00876 udk, UCK R08232
5-Fluorouridine + ATP <=> 5-Fluorouridine monophosphate + ADP
ATP:5-fluorouridine 5'-phosphotransferase
Drug metabolism - other enzymesMetabolism; Xenobiotics biodegradation and metabolism1 genes · 5 rxns
Spalm_02054 K00876 udk, UCK R00513
ATP + Cytidine <=> ADP + CMP
ATP:cytidine 5'-phosphotransferase
Spalm_02054 K00876 udk, UCK R00517
GTP + Cytidine <=> GDP + CMP
GTP:cytidine 5'-phosphotransferase
Spalm_02054 K00876 udk, UCK R00964
ATP + Uridine <=> ADP + UMP
ATP:uridine 5'-phosphotransferase
Spalm_02054 K00876 udk, UCK R00968
GTP + Uridine <=> GDP + UMP
GTP:uridine 5'-phosphotransferase
Spalm_02054 K00876 udk, UCK R08232
5-Fluorouridine + ATP <=> 5-Fluorouridine monophosphate + ADP
ATP:5-fluorouridine 5'-phosphotransferase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Spalm_02054

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Spalm_02051 phosphate ABC transporter substrate-binding protein K02040 pstS — —
Spalm_02052 ATP-binding protein K07636 phoR 2.7.13.3 —
Spalm_02053 response regulator transcription factor — — —
Spalm_02054 nucleoside kinase K00876 udk, UCK 2.7.1.48 R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232
Spalm_02055 phenylalanine--tRNA ligase subunit beta K01890 FARSB, pheT 6.1.1.20 R03660
Spalm_02056 phenylalanine--tRNA ligase subunit alpha K01889 FARSA, pheS 6.1.1.20 R03660
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