Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_BBCE01000026.1:14,528–15,835

Syntrophomonas palmitatica JCM14374 Spalm · 2 genes
2
genes
2
KO-annotated
4
reactions
4
pathways

Activity by pathway — click to expand; ranked by genes involved

Purine metabolismMetabolism; Nucleotide metabolism1 genes · 4 rxns
Spalm_02339 K03040 rpoA R00435
ATP + RNA <=> Diphosphate + RNA
ATP:polynucleotide adenylyltransferase; ATP:RNA adenylyltransferase
Spalm_02339 K03040 rpoA R00441
GTP + RNA <=> Diphosphate + RNA
GTP:RNA guanylyltransferase (DNA-directed); GTP:RNA guanylyltransferase (RNA-directed)
Spalm_02339 K03040 rpoA R00442
CTP + RNA <=> Diphosphate + RNA
CTP:RNA cytidylyltransferase (DNA-directed); CTP:RNA cytidylyltransferase (RNA-directed)
Spalm_02339 K03040 rpoA R00443
UTP + RNA <=> Diphosphate + RNA
UTP:RNA uridylyltransferase
Pyrimidine metabolismMetabolism; Nucleotide metabolism1 genes · 4 rxns
Spalm_02339 K03040 rpoA R00435
ATP + RNA <=> Diphosphate + RNA
ATP:polynucleotide adenylyltransferase; ATP:RNA adenylyltransferase
Spalm_02339 K03040 rpoA R00441
GTP + RNA <=> Diphosphate + RNA
GTP:RNA guanylyltransferase (DNA-directed); GTP:RNA guanylyltransferase (RNA-directed)
Spalm_02339 K03040 rpoA R00442
CTP + RNA <=> Diphosphate + RNA
CTP:RNA cytidylyltransferase (DNA-directed); CTP:RNA cytidylyltransferase (RNA-directed)
Spalm_02339 K03040 rpoA R00443
UTP + RNA <=> Diphosphate + RNA
UTP:RNA uridylyltransferase
RNA polymeraseGenetic Information Processing; Transcription1 genes · 4 rxns
Spalm_02339 K03040 rpoA R00435
ATP + RNA <=> Diphosphate + RNA
ATP:polynucleotide adenylyltransferase; ATP:RNA adenylyltransferase
Spalm_02339 K03040 rpoA R00441
GTP + RNA <=> Diphosphate + RNA
GTP:RNA guanylyltransferase (DNA-directed); GTP:RNA guanylyltransferase (RNA-directed)
Spalm_02339 K03040 rpoA R00442
CTP + RNA <=> Diphosphate + RNA
CTP:RNA cytidylyltransferase (DNA-directed); CTP:RNA cytidylyltransferase (RNA-directed)
Spalm_02339 K03040 rpoA R00443
UTP + RNA <=> Diphosphate + RNA
UTP:RNA uridylyltransferase
RibosomeGenetic Information Processing; Translation1 genes · 0 rxns
Spalm_02340 K02879 RP-L17, MRPL17, rplQ

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Spalm_02339

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Spalm_02339 DNA-directed RNA polymerase subunit alpha K03040 rpoA 2.7.7.6 R00435,R00441,R00442,R00443
Spalm_02340 50S ribosomal protein L17 K02879 RP-L17, MRPL17, rplQ — —
↑ Top




v1.00 @copyright 2026 UCLA