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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_BBCE01000013.1:25,808–28,319

Syntrophomonas palmitatica JCM14374 Spalm · 4 genes
4
genes
3
KO-annotated
4
reactions
5
pathways

Activity by pathway — click to expand; ranked by genes involved

Homologous recombinationGenetic Information Processing; Replication and repair3 genes · 4 rxns
Spalm_01640 K03629 recF
Spalm_01641 K03629 recF
Spalm_01642 K02338 dnaN R00375
dATP + DNA <=> Diphosphate + DNA
deoxyadenosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Spalm_01642 K02338 dnaN R00376
dGTP + DNA <=> Diphosphate + DNA
deoxyguanosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Spalm_01642 K02338 dnaN R00377
dCTP + DNA <=> Diphosphate + DNA
deoxycytidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Spalm_01642 K02338 dnaN R00378
dTTP + DNA <=> Diphosphate + DNA
deoxythymidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Purine metabolismMetabolism; Nucleotide metabolism1 genes · 4 rxns
Spalm_01642 K02338 dnaN R00375
dATP + DNA <=> Diphosphate + DNA
deoxyadenosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Spalm_01642 K02338 dnaN R00376
dGTP + DNA <=> Diphosphate + DNA
deoxyguanosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Spalm_01642 K02338 dnaN R00377
dCTP + DNA <=> Diphosphate + DNA
deoxycytidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Spalm_01642 K02338 dnaN R00378
dTTP + DNA <=> Diphosphate + DNA
deoxythymidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Pyrimidine metabolismMetabolism; Nucleotide metabolism1 genes · 4 rxns
Spalm_01642 K02338 dnaN R00375
dATP + DNA <=> Diphosphate + DNA
deoxyadenosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Spalm_01642 K02338 dnaN R00376
dGTP + DNA <=> Diphosphate + DNA
deoxyguanosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Spalm_01642 K02338 dnaN R00377
dCTP + DNA <=> Diphosphate + DNA
deoxycytidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Spalm_01642 K02338 dnaN R00378
dTTP + DNA <=> Diphosphate + DNA
deoxythymidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
DNA replicationGenetic Information Processing; Replication and repair1 genes · 4 rxns
Spalm_01642 K02338 dnaN R00375
dATP + DNA <=> Diphosphate + DNA
deoxyadenosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Spalm_01642 K02338 dnaN R00376
dGTP + DNA <=> Diphosphate + DNA
deoxyguanosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Spalm_01642 K02338 dnaN R00377
dCTP + DNA <=> Diphosphate + DNA
deoxycytidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Spalm_01642 K02338 dnaN R00378
dTTP + DNA <=> Diphosphate + DNA
deoxythymidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Mismatch repairGenetic Information Processing; Replication and repair1 genes · 4 rxns
Spalm_01642 K02338 dnaN R00375
dATP + DNA <=> Diphosphate + DNA
deoxyadenosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Spalm_01642 K02338 dnaN R00376
dGTP + DNA <=> Diphosphate + DNA
deoxyguanosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Spalm_01642 K02338 dnaN R00377
dCTP + DNA <=> Diphosphate + DNA
deoxycytidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Spalm_01642 K02338 dnaN R00378
dTTP + DNA <=> Diphosphate + DNA
deoxythymidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Spalm_01642

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Spalm_01639 extracellular matrix regulator RemB — — —
Spalm_01640 hypothetical protein K03629 recF — —
Spalm_01641 DNA replication/repair protein RecF K03629 recF — —
Spalm_01642 DNA polymerase III subunit beta K02338 dnaN 2.7.7.7 R00375,R00376,R00377,R00378
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