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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_BBCE01000001.1:27,785–29,573

Syntrophomonas palmitatica JCM14374 Spalm · 3 genes
3
genes
3
KO-annotated
4
reactions
3
pathways

Activity by pathway — click to expand; ranked by genes involved

Pentose phosphate pathwayMetabolism; Carbohydrate metabolism1 genes · 1 rxns
Spalm_00030 K01619 deoC, DERA R01066
2-Deoxy-D-ribose 5-phosphate <=> D-Glyceraldehyde 3-phosphate + Acetaldehyde
2-deoxy-D-ribose-5-phosphate acetaldehyde-lyase (D-glyceraldehyde-3-phosphate-forming)
Pyrimidine metabolismMetabolism; Nucleotide metabolism1 genes · 3 rxns
Spalm_00032 K01489 cdd, CDA R01878
Cytidine + H2O <=> Uridine + Ammonia
cytidine aminohydrolase
Spalm_00032 K01489 cdd, CDA R02485
Deoxycytidine + H2O <=> Deoxyuridine + Ammonia
deoxycytidine aminohydrolase
Spalm_00032 K01489 cdd, CDA R08221
5'-Deoxy-5-fluorocytidine + H2O <=> 5'-Deoxy-5-fluorouridine + Ammonia
5'-deoxy-5-fluorocytidine aminohydrolase
Drug metabolism - other enzymesMetabolism; Xenobiotics biodegradation and metabolism1 genes · 3 rxns
Spalm_00032 K01489 cdd, CDA R01878
Cytidine + H2O <=> Uridine + Ammonia
cytidine aminohydrolase
Spalm_00032 K01489 cdd, CDA R02485
Deoxycytidine + H2O <=> Deoxyuridine + Ammonia
deoxycytidine aminohydrolase
Spalm_00032 K01489 cdd, CDA R08221
5'-Deoxy-5-fluorocytidine + H2O <=> 5'-Deoxy-5-fluorouridine + Ammonia
5'-deoxy-5-fluorocytidine aminohydrolase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Spalm_00032

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Spalm_00030 deoxyribose-phosphate aldolase K01619 deoC, DERA 4.1.2.4 R01066
Spalm_00031 GTPase Era K03595 era, ERAL1 — —
Spalm_00032 cytidine deaminase K01489 cdd, CDA 3.5.4.5 R01878,R02485,R08221
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