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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_BBCE01000016.1:29,578–31,756

Syntrophomonas palmitatica JCM14374 Spalm · 3 genes
3
genes
3
KO-annotated
5
reactions
4
pathways

Activity by pathway — click to expand; ranked by genes involved

Arginine and proline metabolismMetabolism; Amino acid metabolism3 genes · 5 rxns
Spalm_01869 K02626 pdaD R00566
L-Arginine <=> Agmatine + CO2
L-arginine carboxy-lyase (agmatine-forming)
Spalm_01870 K00797 speE, SRM, SPE3 R01920
S-Adenosylmethioninamine + Putrescine <=> 5'-Methylthioadenosine + Spermidine
S-adenosylmethioninamine:putrescine 3-aminopropyltransferase
Spalm_01870 K00797 speE, SRM, SPE3 R02869
S-Adenosylmethioninamine + Spermidine <=> 5'-Methylthioadenosine + Spermine
S-adenosylmethioninamine:spermidine 3-aminopropyltransferase
Spalm_01870 K00797 speE, SRM, SPE3 R08359
S-Adenosylmethioninamine + Cadaverine <=> 5'-Methylthioadenosine + Aminopropylcadaverine
S-adenosylmethioninamine:cadaverine 3-aminopropyltransferase
Spalm_01871 K01480 speB R01157
Agmatine + H2O <=> Putrescine + Urea
agmatine amidinohydrolase
Cysteine and methionine metabolismMetabolism; Amino acid metabolism1 genes · 3 rxns
Spalm_01870 K00797 speE, SRM, SPE3 R01920
S-Adenosylmethioninamine + Putrescine <=> 5'-Methylthioadenosine + Spermidine
S-adenosylmethioninamine:putrescine 3-aminopropyltransferase
Spalm_01870 K00797 speE, SRM, SPE3 R02869
S-Adenosylmethioninamine + Spermidine <=> 5'-Methylthioadenosine + Spermine
S-adenosylmethioninamine:spermidine 3-aminopropyltransferase
Spalm_01870 K00797 speE, SRM, SPE3 R08359
S-Adenosylmethioninamine + Cadaverine <=> 5'-Methylthioadenosine + Aminopropylcadaverine
S-adenosylmethioninamine:cadaverine 3-aminopropyltransferase
beta-Alanine metabolismMetabolism; Metabolism of other amino acids1 genes · 3 rxns
Spalm_01870 K00797 speE, SRM, SPE3 R01920
S-Adenosylmethioninamine + Putrescine <=> 5'-Methylthioadenosine + Spermidine
S-adenosylmethioninamine:putrescine 3-aminopropyltransferase
Spalm_01870 K00797 speE, SRM, SPE3 R02869
S-Adenosylmethioninamine + Spermidine <=> 5'-Methylthioadenosine + Spermine
S-adenosylmethioninamine:spermidine 3-aminopropyltransferase
Spalm_01870 K00797 speE, SRM, SPE3 R08359
S-Adenosylmethioninamine + Cadaverine <=> 5'-Methylthioadenosine + Aminopropylcadaverine
S-adenosylmethioninamine:cadaverine 3-aminopropyltransferase
Glutathione metabolismMetabolism; Metabolism of other amino acids1 genes · 3 rxns
Spalm_01870 K00797 speE, SRM, SPE3 R01920
S-Adenosylmethioninamine + Putrescine <=> 5'-Methylthioadenosine + Spermidine
S-adenosylmethioninamine:putrescine 3-aminopropyltransferase
Spalm_01870 K00797 speE, SRM, SPE3 R02869
S-Adenosylmethioninamine + Spermidine <=> 5'-Methylthioadenosine + Spermine
S-adenosylmethioninamine:spermidine 3-aminopropyltransferase
Spalm_01870 K00797 speE, SRM, SPE3 R08359
S-Adenosylmethioninamine + Cadaverine <=> 5'-Methylthioadenosine + Aminopropylcadaverine
S-adenosylmethioninamine:cadaverine 3-aminopropyltransferase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 3 genes
Spalm_01869 Spalm_01870 Spalm_01871

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Spalm_01869 pyruvoyl-dependent arginine decarboxylase K02626 pdaD 4.1.1.19 R00566
Spalm_01870 polyamine aminopropyltransferase K00797 speE, SRM, SPE3 2.5.1.16 R01920,R02869,R08359
Spalm_01871 agmatinase K01480 speB 3.5.3.11 R01157
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