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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_BBCE01000001.1:29,779–33,787

Syntrophomonas palmitatica JCM14374 Spalm · 5 genes
5
genes
5
KO-annotated
5
reactions
8
pathways

Activity by pathway — click to expand; ranked by genes involved

Peptidoglycan biosynthesisMetabolism; Glycan biosynthesis and metabolism1 genes · 2 rxns
Spalm_00033 K00887 dgkA R02240
ATP + 1,2-Diacyl-sn-glycerol <=> ADP + Phosphatidate
ATP:1,2-diacylglycerol 3-phosphotransferase
Spalm_00033 K00887 dgkA R05626
ATP + di-trans,poly-cis-Undecaprenol <=> ADP + di-trans,poly-cis-Undecaprenyl phosphate
ATP:undecaprenol phosphotransferase
Glycerolipid metabolismMetabolism; Lipid metabolism1 genes · 2 rxns
Spalm_00033 K00887 dgkA R02240
ATP + 1,2-Diacyl-sn-glycerol <=> ADP + Phosphatidate
ATP:1,2-diacylglycerol 3-phosphotransferase
Spalm_00033 K00887 dgkA R05626
ATP + di-trans,poly-cis-Undecaprenol <=> ADP + di-trans,poly-cis-Undecaprenyl phosphate
ATP:undecaprenol phosphotransferase
Glycerophospholipid metabolismMetabolism; Lipid metabolism1 genes · 2 rxns
Spalm_00033 K00887 dgkA R02240
ATP + 1,2-Diacyl-sn-glycerol <=> ADP + Phosphatidate
ATP:1,2-diacylglycerol 3-phosphotransferase
Spalm_00033 K00887 dgkA R05626
ATP + di-trans,poly-cis-Undecaprenol <=> ADP + di-trans,poly-cis-Undecaprenyl phosphate
ATP:undecaprenol phosphotransferase
Phosphatidylinositol signaling systemEnvironmental Information Processing; Signal transduction1 genes · 2 rxns
Spalm_00033 K00887 dgkA R02240
ATP + 1,2-Diacyl-sn-glycerol <=> ADP + Phosphatidate
ATP:1,2-diacylglycerol 3-phosphotransferase
Spalm_00033 K00887 dgkA R05626
ATP + di-trans,poly-cis-Undecaprenol <=> ADP + di-trans,poly-cis-Undecaprenyl phosphate
ATP:undecaprenol phosphotransferase
Phospholipase D signaling pathwayEnvironmental Information Processing; Signal transduction1 genes · 2 rxns
Spalm_00033 K00887 dgkA R02240
ATP + 1,2-Diacyl-sn-glycerol <=> ADP + Phosphatidate
ATP:1,2-diacylglycerol 3-phosphotransferase
Spalm_00033 K00887 dgkA R05626
ATP + di-trans,poly-cis-Undecaprenol <=> ADP + di-trans,poly-cis-Undecaprenyl phosphate
ATP:undecaprenol phosphotransferase
Choline metabolism in cancerHuman Diseases; Cancer: overview1 genes · 2 rxns
Spalm_00033 K00887 dgkA R02240
ATP + 1,2-Diacyl-sn-glycerol <=> ADP + Phosphatidate
ATP:1,2-diacylglycerol 3-phosphotransferase
Spalm_00033 K00887 dgkA R05626
ATP + di-trans,poly-cis-Undecaprenol <=> ADP + di-trans,poly-cis-Undecaprenyl phosphate
ATP:undecaprenol phosphotransferase
Pyrimidine metabolismMetabolism; Nucleotide metabolism1 genes · 3 rxns
Spalm_00034 K01489 cdd, CDA R01878
Cytidine + H2O <=> Uridine + Ammonia
cytidine aminohydrolase
Spalm_00034 K01489 cdd, CDA R02485
Deoxycytidine + H2O <=> Deoxyuridine + Ammonia
deoxycytidine aminohydrolase
Spalm_00034 K01489 cdd, CDA R08221
5'-Deoxy-5-fluorocytidine + H2O <=> 5'-Deoxy-5-fluorouridine + Ammonia
5'-deoxy-5-fluorocytidine aminohydrolase
Drug metabolism - other enzymesMetabolism; Xenobiotics biodegradation and metabolism1 genes · 3 rxns
Spalm_00034 K01489 cdd, CDA R01878
Cytidine + H2O <=> Uridine + Ammonia
cytidine aminohydrolase
Spalm_00034 K01489 cdd, CDA R02485
Deoxycytidine + H2O <=> Deoxyuridine + Ammonia
deoxycytidine aminohydrolase
Spalm_00034 K01489 cdd, CDA R08221
5'-Deoxy-5-fluorocytidine + H2O <=> 5'-Deoxy-5-fluorouridine + Ammonia
5'-deoxy-5-fluorocytidine aminohydrolase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 2 genes
Spalm_00033 Spalm_00034
Biosynthesis of secondary metabolites 1 genes
Spalm_00033

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Spalm_00033 diacylglycerol kinase family protein K00887 dgkA; K00901 dgkA, DGK 2.7.1.107,2.7.1.66 R02240,R05626
Spalm_00034 rRNA maturation RNase YbeY K01489 cdd, CDA; K07042 ybeY, yqfG 3.5.4.5 R01878,R02485,R08221
Spalm_00035 HD family phosphohydrolase K07037 pgpH — —
Spalm_00036 PhoH family protein K06217 phoH, phoL — —
Spalm_00037 hypothetical protein K06217 phoH, phoL — —
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