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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_BBCE01000018.1:35,971–40,675

Syntrophomonas palmitatica JCM14374 Spalm · 2 genes
2
genes
2
KO-annotated
13
reactions
14
pathways

Activity by pathway — click to expand; ranked by genes involved

Glycolysis / GluconeogenesisMetabolism; Carbohydrate metabolism1 genes · 8 rxns
Spalm_02021 K00844 HK R00299
ATP + D-Glucose <=> ADP + D-Glucose 6-phosphate
ATP:D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R00760
ATP + D-Fructose <=> ADP + D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R00867
ATP + D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R01326
ATP + D-Mannose <=> ADP + D-Mannose 6-phosphate
ATP:D-mannose 6-phosphotransferase
Spalm_02021 K00844 HK R01600
ATP + beta-D-Glucose <=> ADP + beta-D-Glucose 6-phosphate
ATP:beta-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01786
ATP + alpha-D-Glucose <=> ADP + alpha-D-Glucose 6-phosphate
ATP:alpha-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01961
ATP + D-Glucosamine <=> ADP + D-Glucosamine 6-phosphate
ATP:D-glucosamine 6-phosphotransferase
Spalm_02021 K00844 HK R03920
ATP + beta-D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Pyrimidine metabolismMetabolism; Nucleotide metabolism1 genes · 5 rxns
Spalm_02022 K01955 carB, CPA2 R00256
L-Glutamine + H2O <=> L-Glutamate + Ammonia
L-glutamine amidohydrolase
Spalm_02022 K01955 carB, CPA2 R00575
2 ATP + L-Glutamine + HCO3- + H2O <=> 2 ADP + Orthophosphate + L-Glutamate + Carbamoyl phosphate
HCO3-:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating)
Spalm_02022 K01955 carB, CPA2 R01395
ATP + Carbamate <=> ADP + Carbamoyl phosphate
ATP:carbamate phosphotransferase
Spalm_02022 K01955 carB, CPA2 R10948
ATP + HCO3- <=> ADP + Carboxyphosphate
ATP:HCO3- phosphotransferase
Spalm_02022 K01955 carB, CPA2 R10949
Ammonia + Carboxyphosphate <=> Carbamate + Orthophosphate
Central carbon metabolism in cancerHuman Diseases; Cancer: overview1 genes · 8 rxns
Spalm_02021 K00844 HK R00299
ATP + D-Glucose <=> ADP + D-Glucose 6-phosphate
ATP:D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R00760
ATP + D-Fructose <=> ADP + D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R00867
ATP + D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R01326
ATP + D-Mannose <=> ADP + D-Mannose 6-phosphate
ATP:D-mannose 6-phosphotransferase
Spalm_02021 K00844 HK R01600
ATP + beta-D-Glucose <=> ADP + beta-D-Glucose 6-phosphate
ATP:beta-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01786
ATP + alpha-D-Glucose <=> ADP + alpha-D-Glucose 6-phosphate
ATP:alpha-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01961
ATP + D-Glucosamine <=> ADP + D-Glucosamine 6-phosphate
ATP:D-glucosamine 6-phosphotransferase
Spalm_02021 K00844 HK R03920
ATP + beta-D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Carbohydrate digestion and absorptionOrganismal Systems; Digestive system1 genes · 8 rxns
Spalm_02021 K00844 HK R00299
ATP + D-Glucose <=> ADP + D-Glucose 6-phosphate
ATP:D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R00760
ATP + D-Fructose <=> ADP + D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R00867
ATP + D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R01326
ATP + D-Mannose <=> ADP + D-Mannose 6-phosphate
ATP:D-mannose 6-phosphotransferase
Spalm_02021 K00844 HK R01600
ATP + beta-D-Glucose <=> ADP + beta-D-Glucose 6-phosphate
ATP:beta-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01786
ATP + alpha-D-Glucose <=> ADP + alpha-D-Glucose 6-phosphate
ATP:alpha-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01961
ATP + D-Glucosamine <=> ADP + D-Glucosamine 6-phosphate
ATP:D-glucosamine 6-phosphotransferase
Spalm_02021 K00844 HK R03920
ATP + beta-D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Type II diabetes mellitusHuman Diseases; Endocrine and metabolic disease1 genes · 8 rxns
Spalm_02021 K00844 HK R00299
ATP + D-Glucose <=> ADP + D-Glucose 6-phosphate
ATP:D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R00760
ATP + D-Fructose <=> ADP + D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R00867
ATP + D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R01326
ATP + D-Mannose <=> ADP + D-Mannose 6-phosphate
ATP:D-mannose 6-phosphotransferase
Spalm_02021 K00844 HK R01600
ATP + beta-D-Glucose <=> ADP + beta-D-Glucose 6-phosphate
ATP:beta-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01786
ATP + alpha-D-Glucose <=> ADP + alpha-D-Glucose 6-phosphate
ATP:alpha-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01961
ATP + D-Glucosamine <=> ADP + D-Glucosamine 6-phosphate
ATP:D-glucosamine 6-phosphotransferase
Spalm_02021 K00844 HK R03920
ATP + beta-D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Insulin signaling pathwayOrganismal Systems; Endocrine system1 genes · 8 rxns
Spalm_02021 K00844 HK R00299
ATP + D-Glucose <=> ADP + D-Glucose 6-phosphate
ATP:D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R00760
ATP + D-Fructose <=> ADP + D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R00867
ATP + D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R01326
ATP + D-Mannose <=> ADP + D-Mannose 6-phosphate
ATP:D-mannose 6-phosphotransferase
Spalm_02021 K00844 HK R01600
ATP + beta-D-Glucose <=> ADP + beta-D-Glucose 6-phosphate
ATP:beta-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01786
ATP + alpha-D-Glucose <=> ADP + alpha-D-Glucose 6-phosphate
ATP:alpha-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01961
ATP + D-Glucosamine <=> ADP + D-Glucosamine 6-phosphate
ATP:D-glucosamine 6-phosphotransferase
Spalm_02021 K00844 HK R03920
ATP + beta-D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
HIF-1 signaling pathwayEnvironmental Information Processing; Signal transduction1 genes · 8 rxns
Spalm_02021 K00844 HK R00299
ATP + D-Glucose <=> ADP + D-Glucose 6-phosphate
ATP:D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R00760
ATP + D-Fructose <=> ADP + D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R00867
ATP + D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R01326
ATP + D-Mannose <=> ADP + D-Mannose 6-phosphate
ATP:D-mannose 6-phosphotransferase
Spalm_02021 K00844 HK R01600
ATP + beta-D-Glucose <=> ADP + beta-D-Glucose 6-phosphate
ATP:beta-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01786
ATP + alpha-D-Glucose <=> ADP + alpha-D-Glucose 6-phosphate
ATP:alpha-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01961
ATP + D-Glucosamine <=> ADP + D-Glucosamine 6-phosphate
ATP:D-glucosamine 6-phosphotransferase
Spalm_02021 K00844 HK R03920
ATP + beta-D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Fructose and mannose metabolismMetabolism; Carbohydrate metabolism1 genes · 8 rxns
Spalm_02021 K00844 HK R00299
ATP + D-Glucose <=> ADP + D-Glucose 6-phosphate
ATP:D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R00760
ATP + D-Fructose <=> ADP + D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R00867
ATP + D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R01326
ATP + D-Mannose <=> ADP + D-Mannose 6-phosphate
ATP:D-mannose 6-phosphotransferase
Spalm_02021 K00844 HK R01600
ATP + beta-D-Glucose <=> ADP + beta-D-Glucose 6-phosphate
ATP:beta-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01786
ATP + alpha-D-Glucose <=> ADP + alpha-D-Glucose 6-phosphate
ATP:alpha-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01961
ATP + D-Glucosamine <=> ADP + D-Glucosamine 6-phosphate
ATP:D-glucosamine 6-phosphotransferase
Spalm_02021 K00844 HK R03920
ATP + beta-D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Neomycin, kanamycin and gentamicin biosynthesisMetabolism; Biosynthesis of other secondary metabolites1 genes · 8 rxns
Spalm_02021 K00844 HK R00299
ATP + D-Glucose <=> ADP + D-Glucose 6-phosphate
ATP:D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R00760
ATP + D-Fructose <=> ADP + D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R00867
ATP + D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R01326
ATP + D-Mannose <=> ADP + D-Mannose 6-phosphate
ATP:D-mannose 6-phosphotransferase
Spalm_02021 K00844 HK R01600
ATP + beta-D-Glucose <=> ADP + beta-D-Glucose 6-phosphate
ATP:beta-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01786
ATP + alpha-D-Glucose <=> ADP + alpha-D-Glucose 6-phosphate
ATP:alpha-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01961
ATP + D-Glucosamine <=> ADP + D-Glucosamine 6-phosphate
ATP:D-glucosamine 6-phosphotransferase
Spalm_02021 K00844 HK R03920
ATP + beta-D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Streptomycin biosynthesisMetabolism; Biosynthesis of other secondary metabolites1 genes · 8 rxns
Spalm_02021 K00844 HK R00299
ATP + D-Glucose <=> ADP + D-Glucose 6-phosphate
ATP:D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R00760
ATP + D-Fructose <=> ADP + D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R00867
ATP + D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R01326
ATP + D-Mannose <=> ADP + D-Mannose 6-phosphate
ATP:D-mannose 6-phosphotransferase
Spalm_02021 K00844 HK R01600
ATP + beta-D-Glucose <=> ADP + beta-D-Glucose 6-phosphate
ATP:beta-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01786
ATP + alpha-D-Glucose <=> ADP + alpha-D-Glucose 6-phosphate
ATP:alpha-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01961
ATP + D-Glucosamine <=> ADP + D-Glucosamine 6-phosphate
ATP:D-glucosamine 6-phosphotransferase
Spalm_02021 K00844 HK R03920
ATP + beta-D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Amino sugar and nucleotide sugar metabolismMetabolism; Glycan biosynthesis and metabolism1 genes · 8 rxns
Spalm_02021 K00844 HK R00299
ATP + D-Glucose <=> ADP + D-Glucose 6-phosphate
ATP:D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R00760
ATP + D-Fructose <=> ADP + D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R00867
ATP + D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R01326
ATP + D-Mannose <=> ADP + D-Mannose 6-phosphate
ATP:D-mannose 6-phosphotransferase
Spalm_02021 K00844 HK R01600
ATP + beta-D-Glucose <=> ADP + beta-D-Glucose 6-phosphate
ATP:beta-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01786
ATP + alpha-D-Glucose <=> ADP + alpha-D-Glucose 6-phosphate
ATP:alpha-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01961
ATP + D-Glucosamine <=> ADP + D-Glucosamine 6-phosphate
ATP:D-glucosamine 6-phosphotransferase
Spalm_02021 K00844 HK R03920
ATP + beta-D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Starch and sucrose metabolismMetabolism; Carbohydrate metabolism1 genes · 8 rxns
Spalm_02021 K00844 HK R00299
ATP + D-Glucose <=> ADP + D-Glucose 6-phosphate
ATP:D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R00760
ATP + D-Fructose <=> ADP + D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R00867
ATP + D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R01326
ATP + D-Mannose <=> ADP + D-Mannose 6-phosphate
ATP:D-mannose 6-phosphotransferase
Spalm_02021 K00844 HK R01600
ATP + beta-D-Glucose <=> ADP + beta-D-Glucose 6-phosphate
ATP:beta-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01786
ATP + alpha-D-Glucose <=> ADP + alpha-D-Glucose 6-phosphate
ATP:alpha-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01961
ATP + D-Glucosamine <=> ADP + D-Glucosamine 6-phosphate
ATP:D-glucosamine 6-phosphotransferase
Spalm_02021 K00844 HK R03920
ATP + beta-D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Galactose metabolismMetabolism; Carbohydrate metabolism1 genes · 8 rxns
Spalm_02021 K00844 HK R00299
ATP + D-Glucose <=> ADP + D-Glucose 6-phosphate
ATP:D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R00760
ATP + D-Fructose <=> ADP + D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R00867
ATP + D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Spalm_02021 K00844 HK R01326
ATP + D-Mannose <=> ADP + D-Mannose 6-phosphate
ATP:D-mannose 6-phosphotransferase
Spalm_02021 K00844 HK R01600
ATP + beta-D-Glucose <=> ADP + beta-D-Glucose 6-phosphate
ATP:beta-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01786
ATP + alpha-D-Glucose <=> ADP + alpha-D-Glucose 6-phosphate
ATP:alpha-D-glucose 6-phosphotransferase
Spalm_02021 K00844 HK R01961
ATP + D-Glucosamine <=> ADP + D-Glucosamine 6-phosphate
ATP:D-glucosamine 6-phosphotransferase
Spalm_02021 K00844 HK R03920
ATP + beta-D-Fructose <=> ADP + beta-D-Fructose 6-phosphate
ATP:D-fructose 6-phosphotransferase
Alanine, aspartate and glutamate metabolismMetabolism; Amino acid metabolism1 genes · 5 rxns
Spalm_02022 K01955 carB, CPA2 R00256
L-Glutamine + H2O <=> L-Glutamate + Ammonia
L-glutamine amidohydrolase
Spalm_02022 K01955 carB, CPA2 R00575
2 ATP + L-Glutamine + HCO3- + H2O <=> 2 ADP + Orthophosphate + L-Glutamate + Carbamoyl phosphate
HCO3-:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating)
Spalm_02022 K01955 carB, CPA2 R01395
ATP + Carbamate <=> ADP + Carbamoyl phosphate
ATP:carbamate phosphotransferase
Spalm_02022 K01955 carB, CPA2 R10948
ATP + HCO3- <=> ADP + Carboxyphosphate
ATP:HCO3- phosphotransferase
Spalm_02022 K01955 carB, CPA2 R10949
Ammonia + Carboxyphosphate <=> Carbamate + Orthophosphate

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 2 genes
Spalm_02021 Spalm_02022
Carbon metabolism 1 genes
Spalm_02021
Microbial metabolism in diverse environments 1 genes
Spalm_02021
Map 01130 1 genes
Spalm_02021
Biosynthesis of secondary metabolites 1 genes
Spalm_02021

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Spalm_02021 hypothetical protein K00844 HK 2.7.1.1 R00299,R00760,R00867,R01326,R01600,R01786,R01961,R03920
Spalm_02022 carbamoyl-phosphate synthase large subunit K01955 carB, CPA2 6.3.5.5 R00256,R00575,R01395,R10948,R10949
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