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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_BBCE01000004.1:88,265–91,944

Syntrophomonas palmitatica JCM14374 Spalm · 5 genes
5
genes
4
KO-annotated
5
reactions
7
pathways

Activity by pathway — click to expand; ranked by genes involved

Pentose phosphate pathwayMetabolism; Carbohydrate metabolism2 genes · 5 rxns
Spalm_00676 K01624 FBA, fbaA R01068
D-Fructose 1,6-bisphosphate <=> Glycerone phosphate + D-Glyceraldehyde 3-phosphate
D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase (glycerone-phosphate-forming)
Spalm_00676 K01624 FBA, fbaA R01070
beta-D-Fructose 1,6-bisphosphate <=> Glycerone phosphate + D-Glyceraldehyde 3-phosphate
beta-D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase (glycerone-phosphate-forming)
Spalm_00676 K01624 FBA, fbaA R01829
Sedoheptulose 1,7-bisphosphate <=> Glycerone phosphate + D-Erythrose 4-phosphate
sedoheptulose 1,7-bisphosphate D-glyceraldehyde-3-phosphate-lyase
Spalm_00676 K01624 FBA, fbaA R02568
D-Fructose 1-phosphate <=> Glycerone phosphate + D-Glyceraldehyde
D-fructose 1-phosphate D-glyceraldehyde-3-phosphate-lyase
Spalm_00677 K00616 TALDO1, talB, talA R01827
Sedoheptulose 7-phosphate + D-Glyceraldehyde 3-phosphate <=> D-Erythrose 4-phosphate + beta-D-Fructose 6-phosphate
sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase
Two-component systemEnvironmental Information Processing; Signal transduction1 genes · 0 rxns
Spalm_00675 K02490 spo0F
Quorum sensingCellular Processes; Cellular community - prokaryotes1 genes · 0 rxns
Spalm_00675 K02490 spo0F
Glycolysis / GluconeogenesisMetabolism; Carbohydrate metabolism1 genes · 4 rxns
Spalm_00676 K01624 FBA, fbaA R01068
D-Fructose 1,6-bisphosphate <=> Glycerone phosphate + D-Glyceraldehyde 3-phosphate
D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase (glycerone-phosphate-forming)
Spalm_00676 K01624 FBA, fbaA R01070
beta-D-Fructose 1,6-bisphosphate <=> Glycerone phosphate + D-Glyceraldehyde 3-phosphate
beta-D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase (glycerone-phosphate-forming)
Spalm_00676 K01624 FBA, fbaA R01829
Sedoheptulose 1,7-bisphosphate <=> Glycerone phosphate + D-Erythrose 4-phosphate
sedoheptulose 1,7-bisphosphate D-glyceraldehyde-3-phosphate-lyase
Spalm_00676 K01624 FBA, fbaA R02568
D-Fructose 1-phosphate <=> Glycerone phosphate + D-Glyceraldehyde
D-fructose 1-phosphate D-glyceraldehyde-3-phosphate-lyase
Fructose and mannose metabolismMetabolism; Carbohydrate metabolism1 genes · 4 rxns
Spalm_00676 K01624 FBA, fbaA R01068
D-Fructose 1,6-bisphosphate <=> Glycerone phosphate + D-Glyceraldehyde 3-phosphate
D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase (glycerone-phosphate-forming)
Spalm_00676 K01624 FBA, fbaA R01070
beta-D-Fructose 1,6-bisphosphate <=> Glycerone phosphate + D-Glyceraldehyde 3-phosphate
beta-D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase (glycerone-phosphate-forming)
Spalm_00676 K01624 FBA, fbaA R01829
Sedoheptulose 1,7-bisphosphate <=> Glycerone phosphate + D-Erythrose 4-phosphate
sedoheptulose 1,7-bisphosphate D-glyceraldehyde-3-phosphate-lyase
Spalm_00676 K01624 FBA, fbaA R02568
D-Fructose 1-phosphate <=> Glycerone phosphate + D-Glyceraldehyde
D-fructose 1-phosphate D-glyceraldehyde-3-phosphate-lyase
Methane metabolismMetabolism; Energy metabolism1 genes · 4 rxns
Spalm_00676 K01624 FBA, fbaA R01068
D-Fructose 1,6-bisphosphate <=> Glycerone phosphate + D-Glyceraldehyde 3-phosphate
D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase (glycerone-phosphate-forming)
Spalm_00676 K01624 FBA, fbaA R01070
beta-D-Fructose 1,6-bisphosphate <=> Glycerone phosphate + D-Glyceraldehyde 3-phosphate
beta-D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase (glycerone-phosphate-forming)
Spalm_00676 K01624 FBA, fbaA R01829
Sedoheptulose 1,7-bisphosphate <=> Glycerone phosphate + D-Erythrose 4-phosphate
sedoheptulose 1,7-bisphosphate D-glyceraldehyde-3-phosphate-lyase
Spalm_00676 K01624 FBA, fbaA R02568
D-Fructose 1-phosphate <=> Glycerone phosphate + D-Glyceraldehyde
D-fructose 1-phosphate D-glyceraldehyde-3-phosphate-lyase
Carbon fixation by Calvin cycleMetabolism; Energy metabolism1 genes · 4 rxns
Spalm_00676 K01624 FBA, fbaA R01068
D-Fructose 1,6-bisphosphate <=> Glycerone phosphate + D-Glyceraldehyde 3-phosphate
D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase (glycerone-phosphate-forming)
Spalm_00676 K01624 FBA, fbaA R01070
beta-D-Fructose 1,6-bisphosphate <=> Glycerone phosphate + D-Glyceraldehyde 3-phosphate
beta-D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase (glycerone-phosphate-forming)
Spalm_00676 K01624 FBA, fbaA R01829
Sedoheptulose 1,7-bisphosphate <=> Glycerone phosphate + D-Erythrose 4-phosphate
sedoheptulose 1,7-bisphosphate D-glyceraldehyde-3-phosphate-lyase
Spalm_00676 K01624 FBA, fbaA R02568
D-Fructose 1-phosphate <=> Glycerone phosphate + D-Glyceraldehyde
D-fructose 1-phosphate D-glyceraldehyde-3-phosphate-lyase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 2 genes
Spalm_00676 Spalm_00677
Biosynthesis of secondary metabolites 2 genes
Spalm_00676 Spalm_00677
Microbial metabolism in diverse environments 2 genes
Spalm_00676 Spalm_00677
Map 01130 2 genes
Spalm_00676 Spalm_00677
Carbon metabolism 2 genes
Spalm_00676 Spalm_00677
Biosynthesis of amino acids 2 genes
Spalm_00676 Spalm_00677

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Spalm_00673 signal peptide peptidase SppA K04773 sppA — —
Spalm_00674 YIP1 family protein — — —
Spalm_00675 response regulator K02490 spo0F — —
Spalm_00676 class II fructose-1,6-bisphosphate aldolase K01624 FBA, fbaA 4.1.2.13 R01068,R01070,R01829,R02568
Spalm_00677 fructose-6-phosphate aldolase K00616 TALDO1, talB, talA 2.2.1.2 R01827
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