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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_BBCE01000007.1:101,512–107,729

Syntrophomonas palmitatica JCM14374 Spalm · 5 genes
5
genes
4
KO-annotated
6
reactions
2
pathways

Activity by pathway — click to expand; ranked by genes involved

Aminoacyl-tRNA biosynthesisGenetic Information Processing; Translation2 genes · 2 rxns
Spalm_01081 K01876 DARS2, aspS R05577
tRNA(Asp) + L-Aspartate + ATP <=> L-Aspartyl-tRNA(Asp) + Diphosphate + AMP
L-aspartate:tRNA(Asp) ligase (AMP-forming)
Spalm_01082 K01892 HARS, hisS R03655
ATP + L-Histidine + tRNA(His) <=> AMP + Diphosphate + L-Histidyl-tRNA(His)
L-histidine:tRNA(His) ligase (AMP-forming)
Phenylalanine, tyrosine and tryptophan biosynthesisMetabolism; Amino acid metabolism2 genes · 5 rxns
Spalm_01084 K04518 pheA2 R00691
L-Arogenate <=> L-Phenylalanine + H2O + CO2
L-arogenate hydro-lyase (decarboxylating; L-phenylalanine-forming)
Spalm_01084 K04518 pheA2 R01373
Prephenate <=> Phenylpyruvate + H2O + CO2
prephenate hydro-lyase (decarboxylating; phenylpyruvate-forming)
Spalm_01084 K04518 pheA2 R01715
Chorismate <=> Prephenate
chorismate pyruvatemutase
Spalm_01085 K03856 AROA2, aroA R01715
Chorismate <=> Prephenate
chorismate pyruvatemutase
Spalm_01085 K03856 AROA2, aroA R01826
Phosphoenolpyruvate + D-Erythrose 4-phosphate + H2O <=> 2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate + Orthophosphate
phosphoenolpyruvate:D-erythrose-4-phosphate C-(1-carboxyvinyl)transferase (phosphate hydrolysing, 2-carboxy-2-oxoethyl-forming)

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 2 genes
Spalm_01084 Spalm_01085
Biosynthesis of secondary metabolites 2 genes
Spalm_01084 Spalm_01085
Map 01130 2 genes
Spalm_01084 Spalm_01085
Biosynthesis of amino acids 2 genes
Spalm_01084 Spalm_01085

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Spalm_01081 aspartate--tRNA ligase K01876 DARS2, aspS 6.1.1.12 R05577
Spalm_01082 histidine--tRNA ligase K01892 HARS, hisS 6.1.1.21 R03655
Spalm_01083 coproporphyrinogen dehydrogenase HemZ — — —
Spalm_01084 prephenate dehydratase K04518 pheA2; K14170 pheA 4.2.1.51,5.4.99.5 R00691,R01373,R01715
Spalm_01085 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2, aroA; K04516 AROA1, aroA 2.5.1.54,5.4.99.5 R01715,R01826
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