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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_BBCE01000005.1:110,464–116,188

Syntrophomonas palmitatica JCM14374 Spalm · 6 genes
6
genes
4
KO-annotated
2
reactions
8
pathways

Activity by pathway — click to expand; ranked by genes involved

Glycolysis / GluconeogenesisMetabolism; Carbohydrate metabolism2 genes · 2 rxns
Spalm_00845 K00134 GAPDH, gapA R01061
D-Glyceraldehyde 3-phosphate + Orthophosphate + NAD+ <=> 3-Phospho-D-glyceroyl phosphate + NADH + H+
D-glyceraldehyde-3-phosphate:NAD+ oxidoreductase (phosphorylating)
Spalm_00847 K01803 TPI, tpiA R01015
D-Glyceraldehyde 3-phosphate <=> Glycerone phosphate
D-glyceraldehyde-3-phosphate aldose-ketose-isomerase
Carbon fixation by Calvin cycleMetabolism; Energy metabolism2 genes · 2 rxns
Spalm_00845 K00134 GAPDH, gapA R01061
D-Glyceraldehyde 3-phosphate + Orthophosphate + NAD+ <=> 3-Phospho-D-glyceroyl phosphate + NADH + H+
D-glyceraldehyde-3-phosphate:NAD+ oxidoreductase (phosphorylating)
Spalm_00847 K01803 TPI, tpiA R01015
D-Glyceraldehyde 3-phosphate <=> Glycerone phosphate
D-glyceraldehyde-3-phosphate aldose-ketose-isomerase
Two-component systemEnvironmental Information Processing; Signal transduction1 genes · 0 rxns
Spalm_00842 K03092 rpoN
Biofilm formation - Vibrio choleraeCellular Processes; Cellular community - prokaryotes1 genes · 0 rxns
Spalm_00842 K03092 rpoN
HIF-1 signaling pathwayEnvironmental Information Processing; Signal transduction1 genes · 1 rxns
Spalm_00845 K00134 GAPDH, gapA R01061
D-Glyceraldehyde 3-phosphate + Orthophosphate + NAD+ <=> 3-Phospho-D-glyceroyl phosphate + NADH + H+
D-glyceraldehyde-3-phosphate:NAD+ oxidoreductase (phosphorylating)
Alzheimer diseaseHuman Diseases; Neurodegenerative disease1 genes · 1 rxns
Spalm_00845 K00134 GAPDH, gapA R01061
D-Glyceraldehyde 3-phosphate + Orthophosphate + NAD+ <=> 3-Phospho-D-glyceroyl phosphate + NADH + H+
D-glyceraldehyde-3-phosphate:NAD+ oxidoreductase (phosphorylating)
Fructose and mannose metabolismMetabolism; Carbohydrate metabolism1 genes · 1 rxns
Spalm_00847 K01803 TPI, tpiA R01015
D-Glyceraldehyde 3-phosphate <=> Glycerone phosphate
D-glyceraldehyde-3-phosphate aldose-ketose-isomerase
Inositol phosphate metabolismMetabolism; Carbohydrate metabolism1 genes · 1 rxns
Spalm_00847 K01803 TPI, tpiA R01015
D-Glyceraldehyde 3-phosphate <=> Glycerone phosphate
D-glyceraldehyde-3-phosphate aldose-ketose-isomerase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 2 genes
Spalm_00845 Spalm_00847
Biosynthesis of secondary metabolites 2 genes
Spalm_00845 Spalm_00847
Microbial metabolism in diverse environments 2 genes
Spalm_00845 Spalm_00847
Map 01130 2 genes
Spalm_00845 Spalm_00847
Carbon metabolism 2 genes
Spalm_00845 Spalm_00847
Biosynthesis of amino acids 2 genes
Spalm_00845 Spalm_00847

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Spalm_00842 RNA polymerase factor sigma-54 K03092 rpoN — —
Spalm_00843 sugar-binding domain-containing protein K05311 cggR — —
Spalm_00844 sugar-binding domain-containing protein — — —
Spalm_00845 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH, gapA 1.2.1.12 R01061
Spalm_00846 phosphoglycerate kinase — — —
Spalm_00847 triose-phosphate isomerase K01803 TPI, tpiA 5.3.1.1 R01015
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