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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_CGIH01000045.1:4,397–6,484

Syntrophomonas zehnderi OL-4 Szehn · 3 genes
3
genes
3
KO-annotated
6
reactions
5
pathways

Activity by pathway — click to expand; ranked by genes involved

Pyrimidine metabolismMetabolism; Nucleotide metabolism2 genes · 6 rxns
Szeh_02407 K00943 tmk, DTYMK R02094
ATP + dTMP <=> ADP + dTDP
ATP:dTMP phosphotransferase
Szeh_02407 K00943 tmk, DTYMK R02098
ATP + dUMP <=> ADP + dUDP
ATP:dUMP phosphotransferase
Szeh_02409 K02341 holB R00375
dATP + DNA <=> Diphosphate + DNA
deoxyadenosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_02409 K02341 holB R00376
dGTP + DNA <=> Diphosphate + DNA
deoxyguanosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_02409 K02341 holB R00377
dCTP + DNA <=> Diphosphate + DNA
deoxycytidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_02409 K02341 holB R00378
dTTP + DNA <=> Diphosphate + DNA
deoxythymidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Purine metabolismMetabolism; Nucleotide metabolism1 genes · 4 rxns
Szeh_02409 K02341 holB R00375
dATP + DNA <=> Diphosphate + DNA
deoxyadenosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_02409 K02341 holB R00376
dGTP + DNA <=> Diphosphate + DNA
deoxyguanosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_02409 K02341 holB R00377
dCTP + DNA <=> Diphosphate + DNA
deoxycytidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_02409 K02341 holB R00378
dTTP + DNA <=> Diphosphate + DNA
deoxythymidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
DNA replicationGenetic Information Processing; Replication and repair1 genes · 4 rxns
Szeh_02409 K02341 holB R00375
dATP + DNA <=> Diphosphate + DNA
deoxyadenosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_02409 K02341 holB R00376
dGTP + DNA <=> Diphosphate + DNA
deoxyguanosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_02409 K02341 holB R00377
dCTP + DNA <=> Diphosphate + DNA
deoxycytidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_02409 K02341 holB R00378
dTTP + DNA <=> Diphosphate + DNA
deoxythymidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Mismatch repairGenetic Information Processing; Replication and repair1 genes · 4 rxns
Szeh_02409 K02341 holB R00375
dATP + DNA <=> Diphosphate + DNA
deoxyadenosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_02409 K02341 holB R00376
dGTP + DNA <=> Diphosphate + DNA
deoxyguanosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_02409 K02341 holB R00377
dCTP + DNA <=> Diphosphate + DNA
deoxycytidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_02409 K02341 holB R00378
dTTP + DNA <=> Diphosphate + DNA
deoxythymidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Homologous recombinationGenetic Information Processing; Replication and repair1 genes · 4 rxns
Szeh_02409 K02341 holB R00375
dATP + DNA <=> Diphosphate + DNA
deoxyadenosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_02409 K02341 holB R00376
dGTP + DNA <=> Diphosphate + DNA
deoxyguanosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_02409 K02341 holB R00377
dCTP + DNA <=> Diphosphate + DNA
deoxycytidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_02409 K02341 holB R00378
dTTP + DNA <=> Diphosphate + DNA
deoxythymidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 2 genes
Szeh_02407 Szeh_02409

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Szeh_02407 dTMP kinase K00943 tmk, DTYMK 2.7.4.9 R02094,R02098
Szeh_02408 YaaR family protein K09770 K09770 — —
Szeh_02409 DNA polymerase III subunit K02341 holB 2.7.7.7 R00375,R00376,R00377,R00378
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