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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_CGIH01000040.1:11,713–16,933

Syntrophomonas zehnderi OL-4 Szehn · 6 genes
6
genes
6
KO-annotated
9
reactions
2
pathways

Activity by pathway — click to expand; ranked by genes involved

Phenylalanine, tyrosine and tryptophan biosynthesisMetabolism; Amino acid metabolism6 genes · 12 rxns
Szeh_02284 K00766 trpD R00985
Chorismate + Ammonia <=> Anthranilate + Pyruvate + H2O
chorismate pyruvate-lyase (amino-accepting; anthranilate-forming)
Szeh_02284 K00766 trpD R00986
Chorismate + L-Glutamine <=> Anthranilate + Pyruvate + L-Glutamate
chorismate pyruvate-lyase (amino-accepting)
Szeh_02284 K00766 trpD R01073
N-(5-Phospho-D-ribosyl)anthranilate + Diphosphate <=> Anthranilate + 5-Phospho-alpha-D-ribose 1-diphosphate
N-(5-phospho-D-ribosyl)anthranilate:pyrophosphate phosphoribosyl-transferase
Szeh_02285 K01609 trpC R03508
1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate <=> Indoleglycerol phosphate + CO2 + H2O
1-(2-carboxyphenylamino)-1-deoxy-D-ribulose-5-phosphate carboxy-lyase(cyclizing)
Szeh_02286 K01817 trpF R03509
N-(5-Phospho-D-ribosyl)anthranilate <=> 1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate
N-(5-phospho-beta-D-ribosyl)anthranilate ketol-isomerase
Szeh_02287 K01696 trpB R00674
L-Serine + Indole <=> L-Tryptophan + H2O
L-serine hydro-lyase (adding indole; L-tryptophan-forming)
Szeh_02287 K01696 trpB R02340
Indoleglycerol phosphate <=> Indole + D-Glyceraldehyde 3-phosphate
(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate D-glyceraldehyde-3-phosphate-lyase
Szeh_02287 K01696 trpB R02722
L-Serine + Indoleglycerol phosphate <=> L-Tryptophan + D-Glyceraldehyde 3-phosphate + H2O
L-serine hydro-lyase [adding 1-C-(indol-3-yl)glycerol 3-phosphate; L-tryptophan and glyceraldehyde-3-phosphate-forming]
Szeh_02288 K01695 trpA R00674
L-Serine + Indole <=> L-Tryptophan + H2O
L-serine hydro-lyase (adding indole; L-tryptophan-forming)
Szeh_02288 K01695 trpA R02340
Indoleglycerol phosphate <=> Indole + D-Glyceraldehyde 3-phosphate
(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate D-glyceraldehyde-3-phosphate-lyase
Szeh_02288 K01695 trpA R02722
L-Serine + Indoleglycerol phosphate <=> L-Tryptophan + D-Glyceraldehyde 3-phosphate + H2O
L-serine hydro-lyase [adding 1-C-(indol-3-yl)glycerol 3-phosphate; L-tryptophan and glyceraldehyde-3-phosphate-forming]
Szeh_02289 K03856 AROA2, aroA R01826
Phosphoenolpyruvate + D-Erythrose 4-phosphate + H2O <=> 2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate + Orthophosphate
phosphoenolpyruvate:D-erythrose-4-phosphate C-(1-carboxyvinyl)transferase (phosphate hydrolysing, 2-carboxy-2-oxoethyl-forming)
Glycine, serine and threonine metabolismMetabolism; Amino acid metabolism2 genes · 6 rxns
Szeh_02287 K01696 trpB R00674
L-Serine + Indole <=> L-Tryptophan + H2O
L-serine hydro-lyase (adding indole; L-tryptophan-forming)
Szeh_02287 K01696 trpB R02340
Indoleglycerol phosphate <=> Indole + D-Glyceraldehyde 3-phosphate
(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate D-glyceraldehyde-3-phosphate-lyase
Szeh_02287 K01696 trpB R02722
L-Serine + Indoleglycerol phosphate <=> L-Tryptophan + D-Glyceraldehyde 3-phosphate + H2O
L-serine hydro-lyase [adding 1-C-(indol-3-yl)glycerol 3-phosphate; L-tryptophan and glyceraldehyde-3-phosphate-forming]
Szeh_02288 K01695 trpA R00674
L-Serine + Indole <=> L-Tryptophan + H2O
L-serine hydro-lyase (adding indole; L-tryptophan-forming)
Szeh_02288 K01695 trpA R02340
Indoleglycerol phosphate <=> Indole + D-Glyceraldehyde 3-phosphate
(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate D-glyceraldehyde-3-phosphate-lyase
Szeh_02288 K01695 trpA R02722
L-Serine + Indoleglycerol phosphate <=> L-Tryptophan + D-Glyceraldehyde 3-phosphate + H2O
L-serine hydro-lyase [adding 1-C-(indol-3-yl)glycerol 3-phosphate; L-tryptophan and glyceraldehyde-3-phosphate-forming]

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 6 genes
Szeh_02284 Szeh_02285 Szeh_02286 Szeh_02287 Szeh_02288 Szeh_02289
Biosynthesis of secondary metabolites 6 genes
Szeh_02284 Szeh_02285 Szeh_02286 Szeh_02287 Szeh_02288 Szeh_02289
Map 01130 6 genes
Szeh_02284 Szeh_02285 Szeh_02286 Szeh_02287 Szeh_02288 Szeh_02289
Biosynthesis of amino acids 6 genes
Szeh_02284 Szeh_02285 Szeh_02286 Szeh_02287 Szeh_02288 Szeh_02289

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Szeh_02284 anthranilate phosphoribosyltransferase K00766 trpD; K13497 trpGD 2.4.2.18,4.1.3.27 R00985,R00986,R01073
Szeh_02285 indole-3-glycerol phosphate synthase TrpC K01609 trpC 4.1.1.48 R03508
Szeh_02286 phosphoribosylanthranilate isomerase K01817 trpF 5.3.1.24 R03509
Szeh_02287 tryptophan synthase subunit beta K01696 trpB 4.2.1.20 R00674,R02340,R02722
Szeh_02288 tryptophan synthase subunit alpha K01695 trpA 4.2.1.20 R00674,R02340,R02722
Szeh_02289 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2, aroA 2.5.1.54 R01826
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