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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_CGIH01000042.1:23,979–29,549

Syntrophomonas zehnderi OL-4 Szehn · 5 genes
5
genes
5
KO-annotated
4
reactions
8
pathways

Activity by pathway — click to expand; ranked by genes involved

Glycolysis / GluconeogenesisMetabolism; Carbohydrate metabolism4 genes · 5 rxns
Szeh_02337 K15633 gpmI R01518
2-Phospho-D-glycerate <=> 3-Phospho-D-glycerate
D-phosphoglycerate 2,3-phosphomutase
Szeh_02338 K01803 TPI, tpiA R01015
D-Glyceraldehyde 3-phosphate <=> Glycerone phosphate
D-glyceraldehyde-3-phosphate aldose-ketose-isomerase
Szeh_02339 K00927 PGK, pgk R01015
D-Glyceraldehyde 3-phosphate <=> Glycerone phosphate
D-glyceraldehyde-3-phosphate aldose-ketose-isomerase
Szeh_02339 K00927 PGK, pgk R01512
ATP + 3-Phospho-D-glycerate <=> ADP + 3-Phospho-D-glyceroyl phosphate
ATP:3-phospho-D-glycerate 1-phosphotransferase
Szeh_02340 K00134 GAPDH, gapA R01061
D-Glyceraldehyde 3-phosphate + Orthophosphate + NAD+ <=> 3-Phospho-D-glyceroyl phosphate + NADH + H+
D-glyceraldehyde-3-phosphate:NAD+ oxidoreductase (phosphorylating)
Carbon fixation by Calvin cycleMetabolism; Energy metabolism3 genes · 4 rxns
Szeh_02338 K01803 TPI, tpiA R01015
D-Glyceraldehyde 3-phosphate <=> Glycerone phosphate
D-glyceraldehyde-3-phosphate aldose-ketose-isomerase
Szeh_02339 K00927 PGK, pgk R01015
D-Glyceraldehyde 3-phosphate <=> Glycerone phosphate
D-glyceraldehyde-3-phosphate aldose-ketose-isomerase
Szeh_02339 K00927 PGK, pgk R01512
ATP + 3-Phospho-D-glycerate <=> ADP + 3-Phospho-D-glyceroyl phosphate
ATP:3-phospho-D-glycerate 1-phosphotransferase
Szeh_02340 K00134 GAPDH, gapA R01061
D-Glyceraldehyde 3-phosphate + Orthophosphate + NAD+ <=> 3-Phospho-D-glyceroyl phosphate + NADH + H+
D-glyceraldehyde-3-phosphate:NAD+ oxidoreductase (phosphorylating)
Fructose and mannose metabolismMetabolism; Carbohydrate metabolism2 genes · 3 rxns
Szeh_02338 K01803 TPI, tpiA R01015
D-Glyceraldehyde 3-phosphate <=> Glycerone phosphate
D-glyceraldehyde-3-phosphate aldose-ketose-isomerase
Szeh_02339 K00927 PGK, pgk R01015
D-Glyceraldehyde 3-phosphate <=> Glycerone phosphate
D-glyceraldehyde-3-phosphate aldose-ketose-isomerase
Szeh_02339 K00927 PGK, pgk R01512
ATP + 3-Phospho-D-glycerate <=> ADP + 3-Phospho-D-glyceroyl phosphate
ATP:3-phospho-D-glycerate 1-phosphotransferase
Inositol phosphate metabolismMetabolism; Carbohydrate metabolism2 genes · 3 rxns
Szeh_02338 K01803 TPI, tpiA R01015
D-Glyceraldehyde 3-phosphate <=> Glycerone phosphate
D-glyceraldehyde-3-phosphate aldose-ketose-isomerase
Szeh_02339 K00927 PGK, pgk R01015
D-Glyceraldehyde 3-phosphate <=> Glycerone phosphate
D-glyceraldehyde-3-phosphate aldose-ketose-isomerase
Szeh_02339 K00927 PGK, pgk R01512
ATP + 3-Phospho-D-glycerate <=> ADP + 3-Phospho-D-glyceroyl phosphate
ATP:3-phospho-D-glycerate 1-phosphotransferase
Glycine, serine and threonine metabolismMetabolism; Amino acid metabolism1 genes · 1 rxns
Szeh_02337 K15633 gpmI R01518
2-Phospho-D-glycerate <=> 3-Phospho-D-glycerate
D-phosphoglycerate 2,3-phosphomutase
Methane metabolismMetabolism; Energy metabolism1 genes · 1 rxns
Szeh_02337 K15633 gpmI R01518
2-Phospho-D-glycerate <=> 3-Phospho-D-glycerate
D-phosphoglycerate 2,3-phosphomutase
HIF-1 signaling pathwayEnvironmental Information Processing; Signal transduction1 genes · 1 rxns
Szeh_02340 K00134 GAPDH, gapA R01061
D-Glyceraldehyde 3-phosphate + Orthophosphate + NAD+ <=> 3-Phospho-D-glyceroyl phosphate + NADH + H+
D-glyceraldehyde-3-phosphate:NAD+ oxidoreductase (phosphorylating)
Alzheimer diseaseHuman Diseases; Neurodegenerative disease1 genes · 1 rxns
Szeh_02340 K00134 GAPDH, gapA R01061
D-Glyceraldehyde 3-phosphate + Orthophosphate + NAD+ <=> 3-Phospho-D-glyceroyl phosphate + NADH + H+
D-glyceraldehyde-3-phosphate:NAD+ oxidoreductase (phosphorylating)

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 4 genes
Szeh_02337 Szeh_02338 Szeh_02339 Szeh_02340
Biosynthesis of secondary metabolites 4 genes
Szeh_02337 Szeh_02338 Szeh_02339 Szeh_02340
Microbial metabolism in diverse environments 4 genes
Szeh_02337 Szeh_02338 Szeh_02339 Szeh_02340
Map 01130 4 genes
Szeh_02337 Szeh_02338 Szeh_02339 Szeh_02340
Carbon metabolism 4 genes
Szeh_02337 Szeh_02338 Szeh_02339 Szeh_02340
Biosynthesis of amino acids 4 genes
Szeh_02337 Szeh_02338 Szeh_02339 Szeh_02340

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Szeh_02337 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI 5.4.2.12 R01518
Szeh_02338 triose-phosphate isomerase K01803 TPI, tpiA 5.3.1.1 R01015
Szeh_02339 phosphoglycerate kinase K00927 PGK, pgk; K01803 TPI, tpiA 2.7.2.3,5.3.1.1 R01015,R01512
Szeh_02340 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH, gapA 1.2.1.12 R01061
Szeh_02341 sugar-binding transcriptional regulator K05311 cggR — —
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