Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_CGIH01000013.1:35,267–39,550

Syntrophomonas zehnderi OL-4 Szehn · 6 genes
6
genes
3
KO-annotated
3
reactions
7
pathways

Activity by pathway — click to expand; ranked by genes involved

Pyruvate metabolismMetabolism; Carbohydrate metabolism2 genes · 3 rxns
Szeh_00867 R00217
Oxaloacetate <=> Pyruvate + CO2
oxaloacetate carboxy-lyase (pyruvate-forming)
Szeh_00868 K01965 PCCA, pccA R00742
ATP + Acetyl-CoA + HCO3- <=> ADP + Orthophosphate + Malonyl-CoA
acetyl-CoA:carbon-dioxide ligase (ADP-forming)
Szeh_00868 K01965 PCCA, pccA R01859
ATP + Propanoyl-CoA + HCO3- <=> ADP + Orthophosphate + (S)-Methylmalonyl-CoA
propanoyl-CoA:carbon-dioxide ligase (ADP-forming)
Fatty acid biosynthesisMetabolism; Lipid metabolism1 genes · 2 rxns
Szeh_00868 K01965 PCCA, pccA R00742
ATP + Acetyl-CoA + HCO3- <=> ADP + Orthophosphate + Malonyl-CoA
acetyl-CoA:carbon-dioxide ligase (ADP-forming)
Szeh_00868 K01965 PCCA, pccA R01859
ATP + Propanoyl-CoA + HCO3- <=> ADP + Orthophosphate + (S)-Methylmalonyl-CoA
propanoyl-CoA:carbon-dioxide ligase (ADP-forming)
Valine, leucine and isoleucine degradationMetabolism; Amino acid metabolism1 genes · 2 rxns
Szeh_00868 K01965 PCCA, pccA R00742
ATP + Acetyl-CoA + HCO3- <=> ADP + Orthophosphate + Malonyl-CoA
acetyl-CoA:carbon-dioxide ligase (ADP-forming)
Szeh_00868 K01965 PCCA, pccA R01859
ATP + Propanoyl-CoA + HCO3- <=> ADP + Orthophosphate + (S)-Methylmalonyl-CoA
propanoyl-CoA:carbon-dioxide ligase (ADP-forming)
Glyoxylate and dicarboxylate metabolismMetabolism; Carbohydrate metabolism1 genes · 2 rxns
Szeh_00868 K01965 PCCA, pccA R00742
ATP + Acetyl-CoA + HCO3- <=> ADP + Orthophosphate + Malonyl-CoA
acetyl-CoA:carbon-dioxide ligase (ADP-forming)
Szeh_00868 K01965 PCCA, pccA R01859
ATP + Propanoyl-CoA + HCO3- <=> ADP + Orthophosphate + (S)-Methylmalonyl-CoA
propanoyl-CoA:carbon-dioxide ligase (ADP-forming)
Propanoate metabolismMetabolism; Carbohydrate metabolism1 genes · 2 rxns
Szeh_00868 K01965 PCCA, pccA R00742
ATP + Acetyl-CoA + HCO3- <=> ADP + Orthophosphate + Malonyl-CoA
acetyl-CoA:carbon-dioxide ligase (ADP-forming)
Szeh_00868 K01965 PCCA, pccA R01859
ATP + Propanoyl-CoA + HCO3- <=> ADP + Orthophosphate + (S)-Methylmalonyl-CoA
propanoyl-CoA:carbon-dioxide ligase (ADP-forming)
Other carbon fixation pathwaysMetabolism; Energy metabolism1 genes · 2 rxns
Szeh_00868 K01965 PCCA, pccA R00742
ATP + Acetyl-CoA + HCO3- <=> ADP + Orthophosphate + Malonyl-CoA
acetyl-CoA:carbon-dioxide ligase (ADP-forming)
Szeh_00868 K01965 PCCA, pccA R01859
ATP + Propanoyl-CoA + HCO3- <=> ADP + Orthophosphate + (S)-Methylmalonyl-CoA
propanoyl-CoA:carbon-dioxide ligase (ADP-forming)
Sulfur relay systemGenetic Information Processing; Folding, sorting and degradation1 genes · 0 rxns
Szeh_00870 K04085 tusA, sirA

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 2 genes
Szeh_00867 Szeh_00868
Biosynthesis of secondary metabolites 1 genes
Szeh_00868
Microbial metabolism in diverse environments 1 genes
Szeh_00868
Map 01130 1 genes
Szeh_00868
Carbon metabolism 1 genes
Szeh_00868
Fatty acid metabolism 1 genes
Szeh_00868

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Szeh_00866 hypothetical protein — — —
Szeh_00867 sodium ion-translocating decarboxylase subunit beta K01572 4.1.1.3 R00217
Szeh_00868 biotin/lipoyl-containing protein K01965 PCCA, pccA; K02160 accB, bccP 6.4.1.3 R00742,R01859
Szeh_00869 ketopantoate reductase family protein — — —
Szeh_00870 sulfurtransferase-like selenium metabolism protein YedF K04085 tusA, sirA — —
Szeh_00871 DUF4342 domain-containing protein — — —
↑ Top




v1.00 @copyright 2026 UCLA