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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_CGIH01000012.1:37,358–41,774

Syntrophomonas zehnderi OL-4 Szehn · 4 genes
4
genes
3
KO-annotated
4
reactions
5
pathways

Activity by pathway — click to expand; ranked by genes involved

Homologous recombinationGenetic Information Processing; Replication and repair2 genes · 4 rxns
Szeh_00827 K03629 recF
Szeh_00828 K02338 dnaN R00375
dATP + DNA <=> Diphosphate + DNA
deoxyadenosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_00828 K02338 dnaN R00376
dGTP + DNA <=> Diphosphate + DNA
deoxyguanosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_00828 K02338 dnaN R00377
dCTP + DNA <=> Diphosphate + DNA
deoxycytidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_00828 K02338 dnaN R00378
dTTP + DNA <=> Diphosphate + DNA
deoxythymidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Purine metabolismMetabolism; Nucleotide metabolism1 genes · 4 rxns
Szeh_00828 K02338 dnaN R00375
dATP + DNA <=> Diphosphate + DNA
deoxyadenosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_00828 K02338 dnaN R00376
dGTP + DNA <=> Diphosphate + DNA
deoxyguanosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_00828 K02338 dnaN R00377
dCTP + DNA <=> Diphosphate + DNA
deoxycytidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_00828 K02338 dnaN R00378
dTTP + DNA <=> Diphosphate + DNA
deoxythymidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Pyrimidine metabolismMetabolism; Nucleotide metabolism1 genes · 4 rxns
Szeh_00828 K02338 dnaN R00375
dATP + DNA <=> Diphosphate + DNA
deoxyadenosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_00828 K02338 dnaN R00376
dGTP + DNA <=> Diphosphate + DNA
deoxyguanosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_00828 K02338 dnaN R00377
dCTP + DNA <=> Diphosphate + DNA
deoxycytidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_00828 K02338 dnaN R00378
dTTP + DNA <=> Diphosphate + DNA
deoxythymidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
DNA replicationGenetic Information Processing; Replication and repair1 genes · 4 rxns
Szeh_00828 K02338 dnaN R00375
dATP + DNA <=> Diphosphate + DNA
deoxyadenosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_00828 K02338 dnaN R00376
dGTP + DNA <=> Diphosphate + DNA
deoxyguanosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_00828 K02338 dnaN R00377
dCTP + DNA <=> Diphosphate + DNA
deoxycytidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_00828 K02338 dnaN R00378
dTTP + DNA <=> Diphosphate + DNA
deoxythymidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Mismatch repairGenetic Information Processing; Replication and repair1 genes · 4 rxns
Szeh_00828 K02338 dnaN R00375
dATP + DNA <=> Diphosphate + DNA
deoxyadenosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_00828 K02338 dnaN R00376
dGTP + DNA <=> Diphosphate + DNA
deoxyguanosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_00828 K02338 dnaN R00377
dCTP + DNA <=> Diphosphate + DNA
deoxycytidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
Szeh_00828 K02338 dnaN R00378
dTTP + DNA <=> Diphosphate + DNA
deoxythymidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Szeh_00828

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Szeh_00825 DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB 5.99.1.3 —
Szeh_00826 extracellular matrix regulator RemB — — —
Szeh_00827 DNA replication/repair protein RecF K03629 recF — —
Szeh_00828 DNA polymerase III subunit beta K02338 dnaN 2.7.7.7 R00375,R00376,R00377,R00378
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