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Nitrogen Fixation CANT-Hyd
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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_CGIH01000004.1:140,884–143,423

Syntrophomonas zehnderi OL-4 Szehn · 4 genes
4
genes
3
KO-annotated
5
reactions
10
pathways

Activity by pathway — click to expand; ranked by genes involved

Pentose phosphate pathwayMetabolism; Carbohydrate metabolism1 genes · 2 rxns
Szeh_00231 K01808 rpiB R01056
D-Ribose 5-phosphate <=> D-Ribulose 5-phosphate
D-ribose-5-phosphate aldose-ketose-isomerase
Szeh_00231 K01808 rpiB R09030
D-Allose 6-phosphate <=> D-Allulose 6-phosphate
D-allose-6-phosphate aldose-ketose-isomerase
Fructose and mannose metabolismMetabolism; Carbohydrate metabolism1 genes · 2 rxns
Szeh_00231 K01808 rpiB R01056
D-Ribose 5-phosphate <=> D-Ribulose 5-phosphate
D-ribose-5-phosphate aldose-ketose-isomerase
Szeh_00231 K01808 rpiB R09030
D-Allose 6-phosphate <=> D-Allulose 6-phosphate
D-allose-6-phosphate aldose-ketose-isomerase
Carbon fixation by Calvin cycleMetabolism; Energy metabolism1 genes · 2 rxns
Szeh_00231 K01808 rpiB R01056
D-Ribose 5-phosphate <=> D-Ribulose 5-phosphate
D-ribose-5-phosphate aldose-ketose-isomerase
Szeh_00231 K01808 rpiB R09030
D-Allose 6-phosphate <=> D-Allulose 6-phosphate
D-allose-6-phosphate aldose-ketose-isomerase
Glycine, serine and threonine metabolismMetabolism; Amino acid metabolism1 genes · 2 rxns
Szeh_00232 K00600 glyA, SHMT R00945
5,10-Methylenetetrahydrofolate + Glycine + H2O <=> Tetrahydrofolate + L-Serine
5,10-methylenetetrahydrofolate:glycine hydroxymethyltransferase
Szeh_00232 K00600 glyA, SHMT R09099
L-Serine + 5,6,7,8-Tetrahydromethanopterin <=> 5,10-Methylenetetrahydromethanopterin + Glycine + H2O
5,10-methylenetetrahydromethanopterin:glycine hydroxymethyltransferase
Cyanoamino acid metabolismMetabolism; Metabolism of other amino acids1 genes · 2 rxns
Szeh_00232 K00600 glyA, SHMT R00945
5,10-Methylenetetrahydrofolate + Glycine + H2O <=> Tetrahydrofolate + L-Serine
5,10-methylenetetrahydrofolate:glycine hydroxymethyltransferase
Szeh_00232 K00600 glyA, SHMT R09099
L-Serine + 5,6,7,8-Tetrahydromethanopterin <=> 5,10-Methylenetetrahydromethanopterin + Glycine + H2O
5,10-methylenetetrahydromethanopterin:glycine hydroxymethyltransferase
Glyoxylate and dicarboxylate metabolismMetabolism; Carbohydrate metabolism1 genes · 2 rxns
Szeh_00232 K00600 glyA, SHMT R00945
5,10-Methylenetetrahydrofolate + Glycine + H2O <=> Tetrahydrofolate + L-Serine
5,10-methylenetetrahydrofolate:glycine hydroxymethyltransferase
Szeh_00232 K00600 glyA, SHMT R09099
L-Serine + 5,6,7,8-Tetrahydromethanopterin <=> 5,10-Methylenetetrahydromethanopterin + Glycine + H2O
5,10-methylenetetrahydromethanopterin:glycine hydroxymethyltransferase
One carbon pool by folateMetabolism; Metabolism of cofactors and vitamins1 genes · 2 rxns
Szeh_00232 K00600 glyA, SHMT R00945
5,10-Methylenetetrahydrofolate + Glycine + H2O <=> Tetrahydrofolate + L-Serine
5,10-methylenetetrahydrofolate:glycine hydroxymethyltransferase
Szeh_00232 K00600 glyA, SHMT R09099
L-Serine + 5,6,7,8-Tetrahydromethanopterin <=> 5,10-Methylenetetrahydromethanopterin + Glycine + H2O
5,10-methylenetetrahydromethanopterin:glycine hydroxymethyltransferase
Methane metabolismMetabolism; Energy metabolism1 genes · 2 rxns
Szeh_00232 K00600 glyA, SHMT R00945
5,10-Methylenetetrahydrofolate + Glycine + H2O <=> Tetrahydrofolate + L-Serine
5,10-methylenetetrahydrofolate:glycine hydroxymethyltransferase
Szeh_00232 K00600 glyA, SHMT R09099
L-Serine + 5,6,7,8-Tetrahydromethanopterin <=> 5,10-Methylenetetrahydromethanopterin + Glycine + H2O
5,10-methylenetetrahydromethanopterin:glycine hydroxymethyltransferase
Antifolate resistanceHuman Diseases; Drug resistance: antineoplastic1 genes · 2 rxns
Szeh_00232 K00600 glyA, SHMT R00945
5,10-Methylenetetrahydrofolate + Glycine + H2O <=> Tetrahydrofolate + L-Serine
5,10-methylenetetrahydrofolate:glycine hydroxymethyltransferase
Szeh_00232 K00600 glyA, SHMT R09099
L-Serine + 5,6,7,8-Tetrahydromethanopterin <=> 5,10-Methylenetetrahydromethanopterin + Glycine + H2O
5,10-methylenetetrahydromethanopterin:glycine hydroxymethyltransferase
Pyrimidine metabolismMetabolism; Nucleotide metabolism1 genes · 1 rxns
Szeh_00233 K01493 comEB R01663
dCMP + H2O <=> dUMP + Ammonia
dCMP aminohydrolase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 3 genes
Szeh_00231 Szeh_00232 Szeh_00233
Biosynthesis of secondary metabolites 2 genes
Szeh_00231 Szeh_00232
Microbial metabolism in diverse environments 2 genes
Szeh_00231 Szeh_00232
Map 01130 2 genes
Szeh_00231 Szeh_00232
Carbon metabolism 2 genes
Szeh_00231 Szeh_00232
Biosynthesis of amino acids 2 genes
Szeh_00231 Szeh_00232

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Szeh_00231 ribose 5-phosphate isomerase B K01808 rpiB 5.3.1.6 R01056,R09030
Szeh_00232 serine hydroxymethyltransferase K00600 glyA, SHMT 2.1.2.1 R00945,R09099
Szeh_00233 deoxycytidylate deaminase K01493 comEB 3.5.4.12 R01663
Szeh_00234 MazG-like family protein — — —
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