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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_CM161535.1:932,716–938,148

Syntrophomonas wolfei saponavida · 5 genes
5
genes
3
KO-annotated
2
reactions
2
pathways

Activity by pathway — click to expand; ranked by genes involved

Glycine, serine and threonine metabolismMetabolism; Amino acid metabolism3 genes · 5 rxns
Sws_00868 K02437 gcvH, GCSH R01221
Glycine + Tetrahydrofolate + NAD+ <=> 5,10-Methylenetetrahydrofolate + Ammonia + CO2 + NADH + H+
glycine:NAD+ 2-oxidoreductase (tetrahydrofolate-methylene-adding); glycine cleavage system
Sws_00869 K00282 gcvPA R01221
Glycine + Tetrahydrofolate + NAD+ <=> 5,10-Methylenetetrahydrofolate + Ammonia + CO2 + NADH + H+
glycine:NAD+ 2-oxidoreductase (tetrahydrofolate-methylene-adding); glycine cleavage system
Sws_00869 K00282 gcvPA R03425
Glycine + Lipoylprotein <=> [Protein]-S8-aminomethyldihydrolipoyllysine + CO2
glycine:lipoylprotein oxidoreductase (decarboxylating and acceptor-aminomethylating)
Sws_00870 K00283 gcvPB R01221
Glycine + Tetrahydrofolate + NAD+ <=> 5,10-Methylenetetrahydrofolate + Ammonia + CO2 + NADH + H+
glycine:NAD+ 2-oxidoreductase (tetrahydrofolate-methylene-adding); glycine cleavage system
Sws_00870 K00283 gcvPB R03425
Glycine + Lipoylprotein <=> [Protein]-S8-aminomethyldihydrolipoyllysine + CO2
glycine:lipoylprotein oxidoreductase (decarboxylating and acceptor-aminomethylating)
Glyoxylate and dicarboxylate metabolismMetabolism; Carbohydrate metabolism3 genes · 5 rxns
Sws_00868 K02437 gcvH, GCSH R01221
Glycine + Tetrahydrofolate + NAD+ <=> 5,10-Methylenetetrahydrofolate + Ammonia + CO2 + NADH + H+
glycine:NAD+ 2-oxidoreductase (tetrahydrofolate-methylene-adding); glycine cleavage system
Sws_00869 K00282 gcvPA R01221
Glycine + Tetrahydrofolate + NAD+ <=> 5,10-Methylenetetrahydrofolate + Ammonia + CO2 + NADH + H+
glycine:NAD+ 2-oxidoreductase (tetrahydrofolate-methylene-adding); glycine cleavage system
Sws_00869 K00282 gcvPA R03425
Glycine + Lipoylprotein <=> [Protein]-S8-aminomethyldihydrolipoyllysine + CO2
glycine:lipoylprotein oxidoreductase (decarboxylating and acceptor-aminomethylating)
Sws_00870 K00283 gcvPB R01221
Glycine + Tetrahydrofolate + NAD+ <=> 5,10-Methylenetetrahydrofolate + Ammonia + CO2 + NADH + H+
glycine:NAD+ 2-oxidoreductase (tetrahydrofolate-methylene-adding); glycine cleavage system
Sws_00870 K00283 gcvPB R03425
Glycine + Lipoylprotein <=> [Protein]-S8-aminomethyldihydrolipoyllysine + CO2
glycine:lipoylprotein oxidoreductase (decarboxylating and acceptor-aminomethylating)

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 3 genes
Sws_00868 Sws_00869 Sws_00870
Biosynthesis of secondary metabolites 3 genes
Sws_00868 Sws_00869 Sws_00870
Map 01130 3 genes
Sws_00868 Sws_00869 Sws_00870
Carbon metabolism 3 genes
Sws_00868 Sws_00869 Sws_00870

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Sws_00867 glycine cleavage system aminomethyltransferase GcvT — — —
Sws_00868 glycine cleavage system protein GcvH K02437 gcvH, GCSH — R01221
Sws_00869 aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA 1.4.4.2 R01221,R03425
Sws_00870 aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB 1.4.4.2 R01221,R03425
Sws_00871 MBL fold metallo-hydrolase — — —
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