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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_BBCE01000001.1:159,263–163,261

Syntrophomonas palmitatica JCM14374 Spalm · 6 genes
6
genes
5
KO-annotated
4
reactions
2
pathways

Activity by pathway — click to expand; ranked by genes involved

Purine metabolismMetabolism; Nucleotide metabolism5 genes · 7 rxns
Spalm_00163 K01952 PFAS, purL R04463
ATP + 5'-Phosphoribosyl-N-formylglycinamide + L-Glutamine + H2O <=> ADP + Orthophosphate + 2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine + L-Glutamate
5'-phosphoribosylformylglycinamide:L-glutamine amido-ligase (ADP-forming)
Spalm_00164 K01952 PFAS, purL R04463
ATP + 5'-Phosphoribosyl-N-formylglycinamide + L-Glutamine + H2O <=> ADP + Orthophosphate + 2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine + L-Glutamate
5'-phosphoribosylformylglycinamide:L-glutamine amido-ligase (ADP-forming)
Spalm_00165 K01952 PFAS, purL R04463
ATP + 5'-Phosphoribosyl-N-formylglycinamide + L-Glutamine + H2O <=> ADP + Orthophosphate + 2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine + L-Glutamate
5'-phosphoribosylformylglycinamide:L-glutamine amido-ligase (ADP-forming)
Spalm_00166 K01952 PFAS, purL R04463
ATP + 5'-Phosphoribosyl-N-formylglycinamide + L-Glutamine + H2O <=> ADP + Orthophosphate + 2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine + L-Glutamate
5'-phosphoribosylformylglycinamide:L-glutamine amido-ligase (ADP-forming)
Spalm_00167 K01756 purB, ADSL R01083
N6-(1,2-Dicarboxyethyl)-AMP <=> Fumarate + AMP
N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming)
Spalm_00167 K01756 purB, ADSL R04559
1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole <=> Fumarate + 1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
1-(5'-phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole AMP-lyase
Spalm_00167 K01756 purB, ADSL R04591
ATP + 1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate + L-Aspartate <=> ADP + Orthophosphate + 1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
1-(5-phosphoribosyl)-5-amino-4-carboxyimidazole:L-aspartate ligase (ADP-forming)
Alanine, aspartate and glutamate metabolismMetabolism; Amino acid metabolism1 genes · 3 rxns
Spalm_00167 K01756 purB, ADSL R01083
N6-(1,2-Dicarboxyethyl)-AMP <=> Fumarate + AMP
N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming)
Spalm_00167 K01756 purB, ADSL R04559
1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole <=> Fumarate + 1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
1-(5'-phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole AMP-lyase
Spalm_00167 K01756 purB, ADSL R04591
ATP + 1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate + L-Aspartate <=> ADP + Orthophosphate + 1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
1-(5-phosphoribosyl)-5-amino-4-carboxyimidazole:L-aspartate ligase (ADP-forming)

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 5 genes
Spalm_00163 Spalm_00164 Spalm_00165 Spalm_00166 Spalm_00167
Biosynthesis of secondary metabolites 5 genes
Spalm_00163 Spalm_00164 Spalm_00165 Spalm_00166 Spalm_00167
Map 01130 5 genes
Spalm_00163 Spalm_00164 Spalm_00165 Spalm_00166 Spalm_00167

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Spalm_00162 AIR synthase related protein — — —
Spalm_00163 AIR synthase-related protein K01952 PFAS, purL 6.3.5.3 R04463
Spalm_00164 hypothetical protein K01952 PFAS, purL 6.3.5.3 R04463
Spalm_00165 phosphoribosylformylglycinamidine synthase subunit PurQ K01952 PFAS, purL 6.3.5.3 R04463
Spalm_00166 phosphoribosylformylglycinamidine synthase subunit PurS K01952 PFAS, purL 6.3.5.3 R04463
Spalm_00167 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01756 purB, ADSL; K01923 purC 4.3.2.2,6.3.2.6 R01083,R04559,R04591
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