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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_BBCE01000004.1:78,490–84,650

Syntrophomonas palmitatica JCM14374 Spalm · 6 genes
6
genes
2
KO-annotated
5
reactions
4
pathways

Activity by pathway — click to expand; ranked by genes involved

Aminoacyl-tRNA biosynthesisGenetic Information Processing; Translation1 genes · 1 rxns
Spalm_00668 K01887 RARS, argS R03646
ATP + L-Arginine + tRNA(Arg) <=> AMP + Diphosphate + L-Arginyl-tRNA(Arg)
L-arginine:tRNA(Arg) ligase (AMP-forming)
Purine metabolismMetabolism; Nucleotide metabolism1 genes · 4 rxns
Spalm_00669 K03048 rpoE R00435
ATP + RNA <=> Diphosphate + RNA
ATP:polynucleotide adenylyltransferase; ATP:RNA adenylyltransferase
Spalm_00669 K03048 rpoE R00441
GTP + RNA <=> Diphosphate + RNA
GTP:RNA guanylyltransferase (DNA-directed); GTP:RNA guanylyltransferase (RNA-directed)
Spalm_00669 K03048 rpoE R00442
CTP + RNA <=> Diphosphate + RNA
CTP:RNA cytidylyltransferase (DNA-directed); CTP:RNA cytidylyltransferase (RNA-directed)
Spalm_00669 K03048 rpoE R00443
UTP + RNA <=> Diphosphate + RNA
UTP:RNA uridylyltransferase
Pyrimidine metabolismMetabolism; Nucleotide metabolism1 genes · 4 rxns
Spalm_00669 K03048 rpoE R00435
ATP + RNA <=> Diphosphate + RNA
ATP:polynucleotide adenylyltransferase; ATP:RNA adenylyltransferase
Spalm_00669 K03048 rpoE R00441
GTP + RNA <=> Diphosphate + RNA
GTP:RNA guanylyltransferase (DNA-directed); GTP:RNA guanylyltransferase (RNA-directed)
Spalm_00669 K03048 rpoE R00442
CTP + RNA <=> Diphosphate + RNA
CTP:RNA cytidylyltransferase (DNA-directed); CTP:RNA cytidylyltransferase (RNA-directed)
Spalm_00669 K03048 rpoE R00443
UTP + RNA <=> Diphosphate + RNA
UTP:RNA uridylyltransferase
RNA polymeraseGenetic Information Processing; Transcription1 genes · 4 rxns
Spalm_00669 K03048 rpoE R00435
ATP + RNA <=> Diphosphate + RNA
ATP:polynucleotide adenylyltransferase; ATP:RNA adenylyltransferase
Spalm_00669 K03048 rpoE R00441
GTP + RNA <=> Diphosphate + RNA
GTP:RNA guanylyltransferase (DNA-directed); GTP:RNA guanylyltransferase (RNA-directed)
Spalm_00669 K03048 rpoE R00442
CTP + RNA <=> Diphosphate + RNA
CTP:RNA cytidylyltransferase (DNA-directed); CTP:RNA cytidylyltransferase (RNA-directed)
Spalm_00669 K03048 rpoE R00443
UTP + RNA <=> Diphosphate + RNA
UTP:RNA uridylyltransferase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Spalm_00669

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Spalm_00665 MBL fold metallo-hydrolase — — —
Spalm_00666 HD-GYP domain-containing protein — — —
Spalm_00667 M1 family aminopeptidase — — —
Spalm_00668 arginine--tRNA ligase K01887 RARS, argS 6.1.1.19 R03646
Spalm_00669 DNA-directed RNA polymerase subunit delta K03048 rpoE — R00435,R00441,R00442,R00443
Spalm_00670 MBL fold metallo-hydrolase — — —
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