Reaction Activity

Operon NZ_BBCE01000004.1:134,679–139,451

Syntrophomonas palmitatica JCM14374 Spalm · 5 genes

genes

KO-annotated

reactions

pathways

Terpenoid backbone biosynthesisMetabolism; Metabolism of terpenoids and polyketides2 genes · 3 rxns

Spalm_00726 K00991 ispD R05633

2-C-Methyl-D-erythritol 4-phosphate + CTP <=> 4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol + Diphosphate

CTP: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

Spalm_00727 K01770 ispF R05633

2-C-Methyl-D-erythritol 4-phosphate + CTP <=> 4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol + Diphosphate

CTP: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

Spalm_00727 K01770 ispF R05637

2-Phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol <=> 2-C-Methyl-D-erythritol 2,4-cyclodiphosphate + CMP

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol CMP-lyase (cyclizing)

Aminoacyl-tRNA biosynthesisGenetic Information Processing; Translation1 genes · 2 rxns

Spalm_00728 K09698 gltX R03651

ATP + L-Glutamate + tRNA(Gln) <=> AMP + Diphosphate + L-Glutamyl-tRNA(Gln)

L-glutamate:tRNA(Gln) ligase (AMP-forming)

Spalm_00728 K09698 gltX R05578

tRNA(Glu) + L-Glutamate + ATP <=> L-Glutamyl-tRNA(Glu) + Diphosphate + AMP

L-glutamate:tRNA(Glu) ligase (AMP-forming)

Metabolic pathways 3 genes

Spalm_00726 Spalm_00727 Spalm_00728

Biosynthesis of secondary metabolites 2 genes

Spalm_00726 Spalm_00727

Map 01130 2 genes

Spalm_00726 Spalm_00727

show cofactors (H₂O, ATP, NAD⁺…) drag nodes · click an edge for the reaction

Locus	Product	KO	EC	Reactions
Spalm_00725	PIN/TRAM domain-containing protein	—	—	—
Spalm_00726	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	K00991 ispD	2.7.7.60	R05633
Spalm_00727	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	K01770 ispF; K12506 ispDF	2.7.7.60,4.6.1.12	R05633,R05637
Spalm_00728	glutamate--tRNA ligase	K09698 gltX	6.1.1.24	R03651,R05578
Spalm_00729	methyl-accepting chemotaxis protein	—	—	—