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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_BBCE01000009.1:1–4,703

Syntrophomonas palmitatica JCM14374 Spalm · 5 genes
5
genes
3
KO-annotated
8
reactions
5
pathways

Activity by pathway — click to expand; ranked by genes involved

Valine, leucine and isoleucine biosynthesisMetabolism; Amino acid metabolism1 genes · 7 rxns
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R00006
2-Acetolactate + CO2 <=> 2 Pyruvate
pyruvate:pyruvate acetaldehydetransferase (decarboxylating); 2-acetolactate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R00014
Pyruvate + Thiamin diphosphate <=> 2-(alpha-Hydroxyethyl)thiamine diphosphate + CO2
pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R00226
(S)-2-Acetolactate + CO2 <=> 2 Pyruvate
pyruvate:pyruvate acetaldehydetransferase (decarboxylating); (S)-2-acetolactate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R03050
2-Acetolactate + Thiamin diphosphate <=> 2-(alpha-Hydroxyethyl)thiamine diphosphate + Pyruvate
2-acetolactate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R04672
(S)-2-Acetolactate + Thiamin diphosphate <=> 2-(alpha-Hydroxyethyl)thiamine diphosphate + Pyruvate
(S)-2-acetolactate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R04673
2-Oxobutanoate + 2-(alpha-Hydroxyethyl)thiamine diphosphate <=> (S)-2-Aceto-2-hydroxybutanoate + Thiamin diphosphate
(S)-2-aceto-2-hydroxybutanoate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R08648
Pyruvate + 2-Oxobutanoate <=> (S)-2-Aceto-2-hydroxybutanoate + CO2
pyruvate:2-oxobutanoate acetaldehydetransferase (decarboxylating)
Butanoate metabolismMetabolism; Carbohydrate metabolism1 genes · 7 rxns
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R00006
2-Acetolactate + CO2 <=> 2 Pyruvate
pyruvate:pyruvate acetaldehydetransferase (decarboxylating); 2-acetolactate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R00014
Pyruvate + Thiamin diphosphate <=> 2-(alpha-Hydroxyethyl)thiamine diphosphate + CO2
pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R00226
(S)-2-Acetolactate + CO2 <=> 2 Pyruvate
pyruvate:pyruvate acetaldehydetransferase (decarboxylating); (S)-2-acetolactate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R03050
2-Acetolactate + Thiamin diphosphate <=> 2-(alpha-Hydroxyethyl)thiamine diphosphate + Pyruvate
2-acetolactate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R04672
(S)-2-Acetolactate + Thiamin diphosphate <=> 2-(alpha-Hydroxyethyl)thiamine diphosphate + Pyruvate
(S)-2-acetolactate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R04673
2-Oxobutanoate + 2-(alpha-Hydroxyethyl)thiamine diphosphate <=> (S)-2-Aceto-2-hydroxybutanoate + Thiamin diphosphate
(S)-2-aceto-2-hydroxybutanoate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R08648
Pyruvate + 2-Oxobutanoate <=> (S)-2-Aceto-2-hydroxybutanoate + CO2
pyruvate:2-oxobutanoate acetaldehydetransferase (decarboxylating)
C5-Branched dibasic acid metabolismMetabolism; Carbohydrate metabolism1 genes · 7 rxns
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R00006
2-Acetolactate + CO2 <=> 2 Pyruvate
pyruvate:pyruvate acetaldehydetransferase (decarboxylating); 2-acetolactate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R00014
Pyruvate + Thiamin diphosphate <=> 2-(alpha-Hydroxyethyl)thiamine diphosphate + CO2
pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R00226
(S)-2-Acetolactate + CO2 <=> 2 Pyruvate
pyruvate:pyruvate acetaldehydetransferase (decarboxylating); (S)-2-acetolactate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R03050
2-Acetolactate + Thiamin diphosphate <=> 2-(alpha-Hydroxyethyl)thiamine diphosphate + Pyruvate
2-acetolactate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R04672
(S)-2-Acetolactate + Thiamin diphosphate <=> 2-(alpha-Hydroxyethyl)thiamine diphosphate + Pyruvate
(S)-2-acetolactate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R04673
2-Oxobutanoate + 2-(alpha-Hydroxyethyl)thiamine diphosphate <=> (S)-2-Aceto-2-hydroxybutanoate + Thiamin diphosphate
(S)-2-aceto-2-hydroxybutanoate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R08648
Pyruvate + 2-Oxobutanoate <=> (S)-2-Aceto-2-hydroxybutanoate + CO2
pyruvate:2-oxobutanoate acetaldehydetransferase (decarboxylating)
Pantothenate and CoA biosynthesisMetabolism; Metabolism of cofactors and vitamins1 genes · 7 rxns
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R00006
2-Acetolactate + CO2 <=> 2 Pyruvate
pyruvate:pyruvate acetaldehydetransferase (decarboxylating); 2-acetolactate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R00014
Pyruvate + Thiamin diphosphate <=> 2-(alpha-Hydroxyethyl)thiamine diphosphate + CO2
pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R00226
(S)-2-Acetolactate + CO2 <=> 2 Pyruvate
pyruvate:pyruvate acetaldehydetransferase (decarboxylating); (S)-2-acetolactate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R03050
2-Acetolactate + Thiamin diphosphate <=> 2-(alpha-Hydroxyethyl)thiamine diphosphate + Pyruvate
2-acetolactate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R04672
(S)-2-Acetolactate + Thiamin diphosphate <=> 2-(alpha-Hydroxyethyl)thiamine diphosphate + Pyruvate
(S)-2-acetolactate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R04673
2-Oxobutanoate + 2-(alpha-Hydroxyethyl)thiamine diphosphate <=> (S)-2-Aceto-2-hydroxybutanoate + Thiamin diphosphate
(S)-2-aceto-2-hydroxybutanoate pyruvate-lyase (carboxylating)
Spalm_01210 K01652 E2.2.1.6L, ilvB, ilvG, ilvI R08648
Pyruvate + 2-Oxobutanoate <=> (S)-2-Aceto-2-hydroxybutanoate + CO2
pyruvate:2-oxobutanoate acetaldehydetransferase (decarboxylating)
Amino sugar and nucleotide sugar metabolismMetabolism; Glycan biosynthesis and metabolism1 genes · 1 rxns
Spalm_01212 K15896 pseH R09842
UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine + Acetyl-CoA <=> UDP-2,4-bis(acetamido)-2,4,6-trideoxy-beta-L-altropyranose + CoA
acetyl-CoA:UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine 4-N-acetyltransferase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Spalm_01210
Biosynthesis of secondary metabolites 1 genes
Spalm_01210
Map 01130 1 genes
Spalm_01210
2-Oxocarboxylic acid metabolism 1 genes
Spalm_01210
Biosynthesis of amino acids 1 genes
Spalm_01210

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Spalm_01209 N-acetylneuraminate synthase family protein — — —
Spalm_01210 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L, ilvB, ilvG, ilvI 2.2.1.6 R00006,R00014,R00226,R03050,R04672,R04673,R08648
Spalm_01211 3-hydroxyacyl-ACP dehydratase FabZ family protein — — —
Spalm_01212 GNAT family N-acetyltransferase K15896 pseH 2.3.1.202 R09842
Spalm_01213 glycosyltransferase family 2 protein K20534 gtrB — —
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