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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_CM128632.1:144,543–148,019

Syntrophomonas erecta DSM 16215 · 5 genes
5
genes
5
KO-annotated
2
reactions
5
pathways

Activity by pathway — click to expand; ranked by genes involved

Citrate cycle (TCA cycle)Metabolism; Carbohydrate metabolism4 genes · 6 rxns
Ser_00124 K00177 korC, oorC R01197
2 Reduced ferredoxin + Succinyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + 2-Oxoglutarate + CoA
2-oxoglutarate:ferredoxin oxidoreductase (decarboxylating)
Ser_00125 K00175 korB, oorB, oforB R01196
2 Reduced ferredoxin + Acetyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + Pyruvate + CoA
pyruvate:ferredoxin 2-oxidoreductase (CoA-acetylating)
Ser_00125 K00175 korB, oorB, oforB R01197
2 Reduced ferredoxin + Succinyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + 2-Oxoglutarate + CoA
2-oxoglutarate:ferredoxin oxidoreductase (decarboxylating)
Ser_00126 K00174 korA, oorA, oforA R01196
2 Reduced ferredoxin + Acetyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + Pyruvate + CoA
pyruvate:ferredoxin 2-oxidoreductase (CoA-acetylating)
Ser_00126 K00174 korA, oorA, oforA R01197
2 Reduced ferredoxin + Succinyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + 2-Oxoglutarate + CoA
2-oxoglutarate:ferredoxin oxidoreductase (decarboxylating)
Ser_00127 K00176 korD, oorD R01197
2 Reduced ferredoxin + Succinyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + 2-Oxoglutarate + CoA
2-oxoglutarate:ferredoxin oxidoreductase (decarboxylating)
Other carbon fixation pathwaysMetabolism; Energy metabolism4 genes · 6 rxns
Ser_00124 K00177 korC, oorC R01197
2 Reduced ferredoxin + Succinyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + 2-Oxoglutarate + CoA
2-oxoglutarate:ferredoxin oxidoreductase (decarboxylating)
Ser_00125 K00175 korB, oorB, oforB R01196
2 Reduced ferredoxin + Acetyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + Pyruvate + CoA
pyruvate:ferredoxin 2-oxidoreductase (CoA-acetylating)
Ser_00125 K00175 korB, oorB, oforB R01197
2 Reduced ferredoxin + Succinyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + 2-Oxoglutarate + CoA
2-oxoglutarate:ferredoxin oxidoreductase (decarboxylating)
Ser_00126 K00174 korA, oorA, oforA R01196
2 Reduced ferredoxin + Acetyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + Pyruvate + CoA
pyruvate:ferredoxin 2-oxidoreductase (CoA-acetylating)
Ser_00126 K00174 korA, oorA, oforA R01197
2 Reduced ferredoxin + Succinyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + 2-Oxoglutarate + CoA
2-oxoglutarate:ferredoxin oxidoreductase (decarboxylating)
Ser_00127 K00176 korD, oorD R01197
2 Reduced ferredoxin + Succinyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + 2-Oxoglutarate + CoA
2-oxoglutarate:ferredoxin oxidoreductase (decarboxylating)
Glycolysis / GluconeogenesisMetabolism; Carbohydrate metabolism2 genes · 4 rxns
Ser_00125 K00175 korB, oorB, oforB R01196
2 Reduced ferredoxin + Acetyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + Pyruvate + CoA
pyruvate:ferredoxin 2-oxidoreductase (CoA-acetylating)
Ser_00125 K00175 korB, oorB, oforB R01197
2 Reduced ferredoxin + Succinyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + 2-Oxoglutarate + CoA
2-oxoglutarate:ferredoxin oxidoreductase (decarboxylating)
Ser_00126 K00174 korA, oorA, oforA R01196
2 Reduced ferredoxin + Acetyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + Pyruvate + CoA
pyruvate:ferredoxin 2-oxidoreductase (CoA-acetylating)
Ser_00126 K00174 korA, oorA, oforA R01197
2 Reduced ferredoxin + Succinyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + 2-Oxoglutarate + CoA
2-oxoglutarate:ferredoxin oxidoreductase (decarboxylating)
Pyruvate metabolismMetabolism; Carbohydrate metabolism2 genes · 4 rxns
Ser_00125 K00175 korB, oorB, oforB R01196
2 Reduced ferredoxin + Acetyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + Pyruvate + CoA
pyruvate:ferredoxin 2-oxidoreductase (CoA-acetylating)
Ser_00125 K00175 korB, oorB, oforB R01197
2 Reduced ferredoxin + Succinyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + 2-Oxoglutarate + CoA
2-oxoglutarate:ferredoxin oxidoreductase (decarboxylating)
Ser_00126 K00174 korA, oorA, oforA R01196
2 Reduced ferredoxin + Acetyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + Pyruvate + CoA
pyruvate:ferredoxin 2-oxidoreductase (CoA-acetylating)
Ser_00126 K00174 korA, oorA, oforA R01197
2 Reduced ferredoxin + Succinyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + 2-Oxoglutarate + CoA
2-oxoglutarate:ferredoxin oxidoreductase (decarboxylating)
Butanoate metabolismMetabolism; Carbohydrate metabolism2 genes · 4 rxns
Ser_00125 K00175 korB, oorB, oforB R01196
2 Reduced ferredoxin + Acetyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + Pyruvate + CoA
pyruvate:ferredoxin 2-oxidoreductase (CoA-acetylating)
Ser_00125 K00175 korB, oorB, oforB R01197
2 Reduced ferredoxin + Succinyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + 2-Oxoglutarate + CoA
2-oxoglutarate:ferredoxin oxidoreductase (decarboxylating)
Ser_00126 K00174 korA, oorA, oforA R01196
2 Reduced ferredoxin + Acetyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + Pyruvate + CoA
pyruvate:ferredoxin 2-oxidoreductase (CoA-acetylating)
Ser_00126 K00174 korA, oorA, oforA R01197
2 Reduced ferredoxin + Succinyl-CoA + CO2 + 2 H+ <=> 2 Oxidized ferredoxin + 2-Oxoglutarate + CoA
2-oxoglutarate:ferredoxin oxidoreductase (decarboxylating)

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 4 genes
Ser_00124 Ser_00125 Ser_00126 Ser_00127
Microbial metabolism in diverse environments 4 genes
Ser_00124 Ser_00125 Ser_00126 Ser_00127
Carbon metabolism 4 genes
Ser_00124 Ser_00125 Ser_00126 Ser_00127
Map 01130 2 genes
Ser_00125 Ser_00126

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Ser_00123 FadR/GntR family transcriptional regulator K05799 pdhR — —
Ser_00124 2-oxoacid:acceptor oxidoreductase family protein K00177 korC, oorC 1.2.7.3 R01197
Ser_00125 thiamine pyrophosphate-dependent enzyme K00175 korB, oorB, oforB 1.2.7.11,1.2.7.3 R01196,R01197
Ser_00126 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA, oorA, oforA 1.2.7.11,1.2.7.3 R01196,R01197
Ser_00127 4Fe-4S dicluster domain-containing protein K00176 korD, oorD 1.2.7.3 R01197
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