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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_CM128632.1:330,520–335,796

Syntrophomonas erecta DSM 16215 · 6 genes
6
genes
6
KO-annotated
5
reactions
8
pathways

Activity by pathway — click to expand; ranked by genes involved

Pyrimidine metabolismMetabolism; Nucleotide metabolism2 genes · 6 rxns
Ser_00311 K01489 cdd, CDA R01878
Cytidine + H2O <=> Uridine + Ammonia
cytidine aminohydrolase
Ser_00311 K01489 cdd, CDA R02485
Deoxycytidine + H2O <=> Deoxyuridine + Ammonia
deoxycytidine aminohydrolase
Ser_00311 K01489 cdd, CDA R08221
5'-Deoxy-5-fluorocytidine + H2O <=> 5'-Deoxy-5-fluorouridine + Ammonia
5'-deoxy-5-fluorocytidine aminohydrolase
Ser_00313 K01489 cdd, CDA R01878
Cytidine + H2O <=> Uridine + Ammonia
cytidine aminohydrolase
Ser_00313 K01489 cdd, CDA R02485
Deoxycytidine + H2O <=> Deoxyuridine + Ammonia
deoxycytidine aminohydrolase
Ser_00313 K01489 cdd, CDA R08221
5'-Deoxy-5-fluorocytidine + H2O <=> 5'-Deoxy-5-fluorouridine + Ammonia
5'-deoxy-5-fluorocytidine aminohydrolase
Drug metabolism - other enzymesMetabolism; Xenobiotics biodegradation and metabolism2 genes · 6 rxns
Ser_00311 K01489 cdd, CDA R01878
Cytidine + H2O <=> Uridine + Ammonia
cytidine aminohydrolase
Ser_00311 K01489 cdd, CDA R02485
Deoxycytidine + H2O <=> Deoxyuridine + Ammonia
deoxycytidine aminohydrolase
Ser_00311 K01489 cdd, CDA R08221
5'-Deoxy-5-fluorocytidine + H2O <=> 5'-Deoxy-5-fluorouridine + Ammonia
5'-deoxy-5-fluorocytidine aminohydrolase
Ser_00313 K01489 cdd, CDA R01878
Cytidine + H2O <=> Uridine + Ammonia
cytidine aminohydrolase
Ser_00313 K01489 cdd, CDA R02485
Deoxycytidine + H2O <=> Deoxyuridine + Ammonia
deoxycytidine aminohydrolase
Ser_00313 K01489 cdd, CDA R08221
5'-Deoxy-5-fluorocytidine + H2O <=> 5'-Deoxy-5-fluorouridine + Ammonia
5'-deoxy-5-fluorocytidine aminohydrolase
Peptidoglycan biosynthesisMetabolism; Glycan biosynthesis and metabolism1 genes · 2 rxns
Ser_00312 K00887 dgkA R02240
ATP + 1,2-Diacyl-sn-glycerol <=> ADP + Phosphatidate
ATP:1,2-diacylglycerol 3-phosphotransferase
Ser_00312 K00887 dgkA R05626
ATP + di-trans,poly-cis-Undecaprenol <=> ADP + di-trans,poly-cis-Undecaprenyl phosphate
ATP:undecaprenol phosphotransferase
Glycerolipid metabolismMetabolism; Lipid metabolism1 genes · 2 rxns
Ser_00312 K00887 dgkA R02240
ATP + 1,2-Diacyl-sn-glycerol <=> ADP + Phosphatidate
ATP:1,2-diacylglycerol 3-phosphotransferase
Ser_00312 K00887 dgkA R05626
ATP + di-trans,poly-cis-Undecaprenol <=> ADP + di-trans,poly-cis-Undecaprenyl phosphate
ATP:undecaprenol phosphotransferase
Glycerophospholipid metabolismMetabolism; Lipid metabolism1 genes · 2 rxns
Ser_00312 K00887 dgkA R02240
ATP + 1,2-Diacyl-sn-glycerol <=> ADP + Phosphatidate
ATP:1,2-diacylglycerol 3-phosphotransferase
Ser_00312 K00887 dgkA R05626
ATP + di-trans,poly-cis-Undecaprenol <=> ADP + di-trans,poly-cis-Undecaprenyl phosphate
ATP:undecaprenol phosphotransferase
Phosphatidylinositol signaling systemEnvironmental Information Processing; Signal transduction1 genes · 2 rxns
Ser_00312 K00887 dgkA R02240
ATP + 1,2-Diacyl-sn-glycerol <=> ADP + Phosphatidate
ATP:1,2-diacylglycerol 3-phosphotransferase
Ser_00312 K00887 dgkA R05626
ATP + di-trans,poly-cis-Undecaprenol <=> ADP + di-trans,poly-cis-Undecaprenyl phosphate
ATP:undecaprenol phosphotransferase
Phospholipase D signaling pathwayEnvironmental Information Processing; Signal transduction1 genes · 2 rxns
Ser_00312 K00887 dgkA R02240
ATP + 1,2-Diacyl-sn-glycerol <=> ADP + Phosphatidate
ATP:1,2-diacylglycerol 3-phosphotransferase
Ser_00312 K00887 dgkA R05626
ATP + di-trans,poly-cis-Undecaprenol <=> ADP + di-trans,poly-cis-Undecaprenyl phosphate
ATP:undecaprenol phosphotransferase
Choline metabolism in cancerHuman Diseases; Cancer: overview1 genes · 2 rxns
Ser_00312 K00887 dgkA R02240
ATP + 1,2-Diacyl-sn-glycerol <=> ADP + Phosphatidate
ATP:1,2-diacylglycerol 3-phosphotransferase
Ser_00312 K00887 dgkA R05626
ATP + di-trans,poly-cis-Undecaprenol <=> ADP + di-trans,poly-cis-Undecaprenyl phosphate
ATP:undecaprenol phosphotransferase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 3 genes
Ser_00311 Ser_00312 Ser_00313
Biosynthesis of secondary metabolites 1 genes
Ser_00312

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Ser_00309 PhoH family protein K06217 phoH, phoL — —
Ser_00310 HD family phosphohydrolase K07037 pgpH — —
Ser_00311 rRNA maturation RNase YbeY K01489 cdd, CDA; K07042 ybeY, yqfG 3.5.4.5 R01878,R02485,R08221
Ser_00312 diacylglycerol kinase family protein K00887 dgkA; K00901 dgkA, DGK 2.7.1.107,2.7.1.66 R02240,R05626
Ser_00313 cytidine deaminase K01489 cdd, CDA 3.5.4.5 R01878,R02485,R08221
Ser_00314 GTPase Era K03595 era, ERAL1 — —
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