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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_CM128632.1:469,997–474,248

Syntrophomonas erecta DSM 16215 · 6 genes
6
genes
4
KO-annotated
7
reactions
4
pathways

Activity by pathway — click to expand; ranked by genes involved

Citrate cycle (TCA cycle)Metabolism; Carbohydrate metabolism2 genes · 2 rxns
Ser_00418 K01677 E4.2.1.2AA, fumA R01082
(S)-Malate <=> Fumarate + H2O
(S)-malate hydro-lyase (fumarate-forming)
Ser_00419 K01678 E4.2.1.2AB, fumB R01082
(S)-Malate <=> Fumarate + H2O
(S)-malate hydro-lyase (fumarate-forming)
Pyruvate metabolismMetabolism; Carbohydrate metabolism2 genes · 2 rxns
Ser_00418 K01677 E4.2.1.2AA, fumA R01082
(S)-Malate <=> Fumarate + H2O
(S)-malate hydro-lyase (fumarate-forming)
Ser_00419 K01678 E4.2.1.2AB, fumB R01082
(S)-Malate <=> Fumarate + H2O
(S)-malate hydro-lyase (fumarate-forming)
Other carbon fixation pathwaysMetabolism; Energy metabolism2 genes · 2 rxns
Ser_00418 K01677 E4.2.1.2AA, fumA R01082
(S)-Malate <=> Fumarate + H2O
(S)-malate hydro-lyase (fumarate-forming)
Ser_00419 K01678 E4.2.1.2AB, fumB R01082
(S)-Malate <=> Fumarate + H2O
(S)-malate hydro-lyase (fumarate-forming)
Purine metabolismMetabolism; Nucleotide metabolism2 genes · 12 rxns
Ser_00420 K00989 rph R00426
GTP + H2O <=> GMP + Diphosphate
GTP diphosphohydrolase (diphosphate-forming); guanosine 5'-triphosphate pyrophosphohydrolase
Ser_00420 K00989 rph R00720
ITP + H2O <=> IMP + Diphosphate
inosine 5'-triphosphate pyrophosphohydrolase
Ser_00420 K00989 rph R01855
dGTP + H2O <=> dGMP + Diphosphate
2'-deoxyguanosine 5'-triphosphate diphosphohydrolase
Ser_00420 K00989 rph R02100
dUTP + H2O <=> dUMP + Diphosphate
dUTP nucleotidohydrolase
Ser_00420 K00989 rph R02720
XTP + H2O <=> Xanthosine 5'-phosphate + Diphosphate
XTP pyrophosphohydrolase; XTP diphosphohydrolase (diphosphate-forming)
Ser_00420 K00989 rph R03531
dITP + H2O <=> 2'-Deoxyinosine 5'-phosphate + Diphosphate
2'-deoxyinosine-5'-triphosphate pyrophosphohydrolase; dITP diphosphohydrolase (diphosphate-forming)
Ser_00421 R00426
GTP + H2O <=> GMP + Diphosphate
GTP diphosphohydrolase (diphosphate-forming); guanosine 5'-triphosphate pyrophosphohydrolase
Ser_00421 R00720
ITP + H2O <=> IMP + Diphosphate
inosine 5'-triphosphate pyrophosphohydrolase
Ser_00421 R01855
dGTP + H2O <=> dGMP + Diphosphate
2'-deoxyguanosine 5'-triphosphate diphosphohydrolase
Ser_00421 R02100
dUTP + H2O <=> dUMP + Diphosphate
dUTP nucleotidohydrolase
Ser_00421 R02720
XTP + H2O <=> Xanthosine 5'-phosphate + Diphosphate
XTP pyrophosphohydrolase; XTP diphosphohydrolase (diphosphate-forming)
Ser_00421 R03531
dITP + H2O <=> 2'-Deoxyinosine 5'-phosphate + Diphosphate
2'-deoxyinosine-5'-triphosphate pyrophosphohydrolase; dITP diphosphohydrolase (diphosphate-forming)

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 2 genes
Ser_00418 Ser_00419
Biosynthesis of secondary metabolites 2 genes
Ser_00418 Ser_00419
Microbial metabolism in diverse environments 2 genes
Ser_00418 Ser_00419
Map 01130 2 genes
Ser_00418 Ser_00419
Carbon metabolism 2 genes
Ser_00418 Ser_00419

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Ser_00416 acyl-CoA dehydratase activase — — —
Ser_00417 MBL fold metallo-hydrolase — — —
Ser_00418 fumarate hydratase K01677 E4.2.1.2AA, fumA 4.2.1.2 R01082
Ser_00419 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB, fumB 4.2.1.2 R01082
Ser_00420 ribonuclease PH K00989 rph; K02428 2.7.7.56,3.6.1.66 R00426,R00720,R01855,R02100,R02720,R03531
Ser_00421 XTP/dITP diphosphatase K02428 3.6.1.66 R00426,R00720,R01855,R02100,R02720,R03531
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