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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_CM128632.1:1,411,813–1,413,798

Syntrophomonas erecta DSM 16215 · 3 genes
3
genes
2
KO-annotated
2
reactions
3
pathways

Activity by pathway — click to expand; ranked by genes involved

Glycine, serine and threonine metabolismMetabolism; Amino acid metabolism1 genes · 1 rxns
Ser_01262 K02437 gcvH, GCSH R01221
Glycine + Tetrahydrofolate + NAD+ <=> 5,10-Methylenetetrahydrofolate + Ammonia + CO2 + NADH + H+
glycine:NAD+ 2-oxidoreductase (tetrahydrofolate-methylene-adding); glycine cleavage system
Glyoxylate and dicarboxylate metabolismMetabolism; Carbohydrate metabolism1 genes · 1 rxns
Ser_01262 K02437 gcvH, GCSH R01221
Glycine + Tetrahydrofolate + NAD+ <=> 5,10-Methylenetetrahydrofolate + Ammonia + CO2 + NADH + H+
glycine:NAD+ 2-oxidoreductase (tetrahydrofolate-methylene-adding); glycine cleavage system
Lipoic acid metabolismMetabolism; Metabolism of cofactors and vitamins1 genes · 1 rxns
Ser_01264 K03644 lipA, LIAS, LIP1, LIP5 R07767
[Protein]-N6-(octanoyl)-L-lysine + [Fe-S] cluster scaffold protein carrying a [4Fe-4S]2+ cluster + 2 S-Adenosyl-L-methionine + 2 Reduced [2Fe-2S] ferredoxin + 8 H+ <=> [Protein]-N6-[(R)-dihydrolipoyl]-L-lysine + [Fe-S] cluster scaffold protein + 2 Hydrogen sulfide + 4 Fe2+ + 2 L-Methionine + 2 5'-Deoxyadenosine + 2 Oxidized [2Fe-2S] ferredoxin
[protein]-N6-(octanoyl)-L-lysine:an [Fe-S] cluster scaffold protein carrying a [4Fe-4S]2+ cluster sulfurtransferase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 2 genes
Ser_01262 Ser_01264
Biosynthesis of secondary metabolites 1 genes
Ser_01262
Map 01130 1 genes
Ser_01262
Carbon metabolism 1 genes
Ser_01262

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Ser_01262 glycine cleavage system protein H K02437 gcvH, GCSH — R01221
Ser_01263 lipoyl synthase — — —
Ser_01264 lipoyl(octanoyl) transferase LipB K03644 lipA, LIAS, LIP1, LIP5 2.8.1.8 R07767,R07768
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