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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_CM128632.1:1,958,636–1,962,971

Syntrophomonas erecta DSM 16215 · 4 genes
4
genes
3
KO-annotated
3
reactions
2
pathways

Activity by pathway — click to expand; ranked by genes involved

Thiamine metabolismMetabolism; Metabolism of cofactors and vitamins2 genes · 3 rxns
Ser_01770 K03150 thiH R10246
L-Tyrosine + S-Adenosyl-L-methionine + Reduced acceptor <=> Iminoglycine + 4-Cresol + 5'-Deoxyadenosine + L-Methionine + Acceptor
L-tyrosine 4-methylphenol-lyase (2-iminoacetate-forming)
Ser_01773 K03150 thiH R08701
tRNA containing 2-thiouridine + Glycine + Folinic acid + Reduced acceptor <=> tRNA containing 5-carboxymethylaminomethyl-2-thiouridine + Tetrahydrofolate + Acceptor + H2O
tRNA uridine 5-carboxymethylaminomethyl modification
Ser_01773 K03150 thiH R10246
L-Tyrosine + S-Adenosyl-L-methionine + Reduced acceptor <=> Iminoglycine + 4-Cresol + 5'-Deoxyadenosine + L-Methionine + Acceptor
L-tyrosine 4-methylphenol-lyase (2-iminoacetate-forming)
Biotin metabolismMetabolism; Metabolism of cofactors and vitamins1 genes · 1 rxns
Ser_01772 K01012 bioB R01078
Dethiobiotin + Sulfur donor + 2 S-Adenosyl-L-methionine + 2 e- + 2 H+ <=> Biotin + 2 L-Methionine + 2 5'-Deoxyadenosine
dethiobiotin:sulfur sulfurtransferase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 3 genes
Ser_01770 Ser_01772 Ser_01773

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Ser_01770 [FeFe] hydrogenase H-cluster radical SAM maturase HydG K03150 thiH 4.1.99.19 R10246
Ser_01771 hypothetical protein — — —
Ser_01772 [FeFe] hydrogenase H-cluster radical SAM maturase HydE K01012 bioB 2.8.1.6 R01078
Ser_01773 [FeFe] hydrogenase H-cluster maturation GTPase HydF K03150 thiH; K03650 mnmE, trmE, MSS1 4.1.99.19 R08701,R10246
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