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◀ domain architecture  ·  operons  ·  ❔ guide

Operon NZ_CM128632.1:2,344,817–2,349,006

Syntrophomonas erecta DSM 16215 · 3 genes
3
genes
2
KO-annotated
3
reactions
3
pathways

Activity by pathway — click to expand; ranked by genes involved

Aminoacyl-tRNA biosynthesisGenetic Information Processing; Translation1 genes · 2 rxns
Ser_02133 K01875 SARS, serS R03662
ATP + L-Serine + tRNA(Ser) <=> AMP + Diphosphate + L-Seryl-tRNA(Ser)
L-serine:tRNA(Ser) ligase (AMP-forming)
Ser_02133 K01875 SARS, serS R08218
ATP + L-Serine + tRNA(Sec) <=> AMP + Diphosphate + L-Seryl-tRNA(Sec)
L-serine:tRNASec ligase (AMP-forming)
Glycine, serine and threonine metabolismMetabolism; Amino acid metabolism1 genes · 1 rxns
Ser_02134 K00058 serA, PHGDH R01513
3-Phospho-D-glycerate + NAD+ <=> 3-Phosphonooxypyruvate + NADH + H+
3-phospho-D-glycerate:NAD+ 2-oxidoreductase
Methane metabolismMetabolism; Energy metabolism1 genes · 1 rxns
Ser_02134 K00058 serA, PHGDH R01513
3-Phospho-D-glycerate + NAD+ <=> 3-Phosphonooxypyruvate + NADH + H+
3-phospho-D-glycerate:NAD+ 2-oxidoreductase

Overview / global maps (every metabolic gene maps here)

Metabolic pathways 1 genes
Ser_02134
Microbial metabolism in diverse environments 1 genes
Ser_02134
Map 01130 1 genes
Ser_02134
Carbon metabolism 1 genes
Ser_02134
Biosynthesis of amino acids 1 genes
Ser_02134

Reaction network — compounds linked by the reactions these genes catalyse

drag nodes · click an edge for the reaction

Genes

LocusProductKOECReactions
Ser_02133 serine--tRNA ligase K01875 SARS, serS 6.1.1.11 R03662,R08218
Ser_02134 phosphoglycerate dehydrogenase K00058 serA, PHGDH 1.1.1.399,1.1.1.95 R01513
Ser_02135 pyridoxal-phosphate-dependent aminotransferase family protein — — —
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