Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sws_00608

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
THUMP domain-containing class I SAM-dependent RNA methyltransferase
Gene
—
Location
NZ_CM161535.1:646,966–648,183 (+)   405 aa
Keys
gbid 1718291   gene_oid 8099422454  

Domain architecture

Pfam domain
Pfam signature: pfam22020,pfam02926,pfam01170

Putative operon (same contig + strand, gap ≤ 300 bp)

Sws_00608 ◀ Sws_00609 Sws_00610 Sws_00611 Sws_00612   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

4 proteins across 4 genomes share architecture group #1376  pfam01170,pfam02926,pfam22020

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_00608 ◀ 405 pfam22020,pfam02926,pfam01170
Syntrophomonas curvata DSM15682 / GL#14 Scur_01505 381 pfam22020,pfam02926,pfam01170
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00610 398 pfam22020,pfam02926,pfam01170
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00024 390 pfam22020,pfam02926,pfam01170
↑ Top




v1.00 @copyright 2026 UCLA