Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sws_01854

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
nuclease-related domain-containing protein
Gene
—
Location
NZ_CM161535.1:1,985,514–1,986,182 (+)   222 aa
Keys
gbid 1719550   gene_oid 8099423786   TM×1

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam08378

Putative operon (same contig + strand, gap ≤ 300 bp)

Sws_01854 ◀ Sws_01855   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

4 proteins across 4 genomes share architecture group #2135  pfam08378

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_01854 ◀ 222 TM pfam08378
Syntrophomonas curvata DSM15682 / GL#14 Scur_02278 222 pfam08378
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00198 222 TM pfam08378
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00573 222 TM pfam08378
↑ Top




v1.00 @copyright 2026 UCLA