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◀ domain architecture  ·  operons  ·  ❔ guide
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Sws_02996

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
tRNA threonylcarbamoyladenosine dehydratase
Gene
—
Location
NZ_CM161535.1:3,240,484–3,241,242 (+)   252 aa
Keys
gbid 1720698   gene_oid 8099425027  

Domain architecture

Pfam domain
Pfam signature: pfam00899

Putative operon (same contig + strand, gap ≤ 300 bp)

Monocistronic at this threshold — no co-oriented neighbour within 300 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

13 proteins across 8 genomes share architecture group #504  pfam00899

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_00250 274 pfam00899
Syntrophomonas wolfei saponavida / SD2 Sws_02996 ◀ 252 pfam00899
Syntrophomonas wolfei saponavida / SD2 Sws_03008 269 TM pfam00899
Syntrophomonas curvata DSM15682 / GL#14 Scur_01168 231 pfam00899
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01083 232 pfam00899
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02253 232 pfam00899
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01564 251 pfam00899
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02274 152 pfam00899
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00892 237 TM pfam00899
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01933 272 pfam00899
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00809 236 TM pfam00899
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01737 272 pfam00899
Syntrophomonas zehnderi OL-4 Szehn Szeh_01140 242 pfam00899
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