Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sws_03000

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
RrF2 family transcriptional regulator
Gene
—
Location
NZ_CM161535.1:3,244,886–3,245,329 (−)   147 aa
Keys
gbid 1720702   gene_oid 8099425031  

Domain architecture

Pfam domain
Pfam signature: pfam02082

Putative operon (same contig + strand, gap ≤ 300 bp)

Sws_02997 Sws_02998 Sws_02999 Sws_03000 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

18 proteins across 8 genomes share architecture group #791  pfam02082

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_02222 134 pfam02082
Syntrophomonas wolfei saponavida / SD2 Sws_02369 136 pfam02082
Syntrophomonas wolfei saponavida / SD2 Sws_02601 147 pfam02082
Syntrophomonas wolfei saponavida / SD2 Sws_02992 149 pfam02082
Syntrophomonas wolfei saponavida / SD2 Sws_03000 ◀ 147 pfam02082
Syntrophomonas curvata DSM15682 / GL#14 Scur_02425 138 pfam02082
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00073 147 pfam02082
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00087 133 pfam02082
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00684 133 pfam02082
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00698 147 pfam02082
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00970 141 pfam02082
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02291 154 pfam02082
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01451 137 pfam02082
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01308 137 pfam02082
Syntrophomonas zehnderi OL-4 Szehn Szeh_00180 140 pfam02082
Syntrophomonas zehnderi OL-4 Szehn Szeh_01142 152 pfam02082
Syntrophomonas zehnderi OL-4 Szehn Szeh_01249 133 pfam02082
Syntrophomonas zehnderi OL-4 Szehn Szeh_01835 157 pfam02082
↑ Top




v1.00 @copyright 2026 UCLA