Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sws_03254

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
XdhC family protein
Gene
—
Location
NZ_CM161535.1:3,536,230–3,536,796 (−)   188 aa
Keys
gbid 1720961   gene_oid 8099425309   TM×1

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam13478

Putative operon (same contig + strand, gap ≤ 300 bp)

Monocistronic at this threshold — no co-oriented neighbour within 300 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

3 proteins across 2 genomes share architecture group #1377  pfam13478

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_00723 189 pfam13478
Syntrophomonas wolfei saponavida / SD2 Sws_03254 ◀ 188 TM pfam13478
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00025 269 pfam13478
↑ Top




v1.00 @copyright 2026 UCLA